Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2452 ATGGAGAATACAGTTACTGAGAGAAATGTGCATGATGCATCTGTTGACTACAGAGGTAGACTACCTCTTCGTGCTTCCACTGGTGTATGGAAAGCCGCCCTCTTTGTCCTCGCAATTGAATTTTGTGAAAGAATAAGCTATTTTGGAATAGCAAGTAATCTTATCTCGTACCTGACTAAAGTGATGCATGAAGACCTCGAAACAGCAACCAAGAATGTAAACTATTGGTCAGGAACAACAACCCTGATGCCTCTGGTTGGGGGATTTATAGCTGACACCTATACTGGTAGATTTTATATGATCCTGCTTTCCTCCTTTGTATACCTAATGGGACTAAGCCTCTTGACCATGTCTCAATTCATCCCAAGTATAAAGCCTTGTGACACTGGGATATGCAAACAACCACGAAAAGTTCATGAAGTGTTTTTCTTTTTTTCCCTTTATTGTATTTCCTTGGGTACTGGAGGATACAAACCATGCTTGGAAAGCTTTGGAGCTGACCAATTTGATGATGGTCACTTGGAAGAAAGAAAGAAGAAAATGTCTTTCTTCAATTGGTGGAACTTTGTATTGTGCTTCGCGTTGGTGCTTAGTGCAACAATGATTGTTTATGTTCAAGACTTTGTCAGTTGGGGAGTTGCTTTTCTCATCATAACTTTTCTTATGGCTCTTACTATCATAGCTTTCTTTGTGGGAAGACCATTTTATAGGTACAGAAGGACAGGAAGAAACCCTTTATCCCAAATTTTACAAGTTTTAATTGCAGCAGTAAGGAAAAGAAATTTGTCTTGTCCTTCAAATCCTGCTTTGTTGTATGAGGTCCCACAGTCAGAGAGGTCCAAAGACAGGCTTTTGAGACTCACTAGCACGCTCAGTTTCCTTGACAAGGCTGCAATAATTGATGAGGAACATGTTGAGGAGAAGAACAATCCGTGGAGACTAGCAACAGTGACAAGAGTCGAAGAAACAAAACTCATTATAAATTTAGTTCCCATATGGCTAACTTCATTAACTGTTGGAGTATGTATAGCTCAAGGCACAACACTCTTCGTTAAACAAGCAGCTGCAATGAACTTAAAGATAAGTGACAACTTCAAAATCCCAGCCGCTTCCATGTCCTCTCTTTCAGCGGTTGGTATCTTAATAATTGTCCCAATATATGATAGGATTATTGTTCCACTTATGAGAAAAATTACTGGTAATGAAAGAGGCATTGACATCCTTACGAGGATCAGCATTGGTATGGCACTATATGTCATACTCATGATTGTTGCTGCCTTAGTAGAAACGAAGAGACTAAGAATGGAAACCGACAACAATTCTATGAGCGTGTTGTGGTTGATACCCCAATACTTAATCCTTGGCGTAGGAGATTCATTTTGTATAGTTGGTTTGCAAGAGTACTTCTATGATCAAGTTCCTCACTCAATGAAAAGCTTAGGAATGGGGTTGTATCTTAGTGTGATTGGAGCAGGGTACTTCTTAAGCAACTTTTTTATAATAATCGTGGACCATGTCACTGGGAAAAAAGGCAAAAGTTGGATTGGAAAGGACATAAATTCAAGCCATCTGGATAAGTTTTATTGGTTGTTAACCATCATAAATGCTTTAAATTTGTGTCTCTTTCTCTTCTTGGCAAAAATGCATACTTATAAGACTGTGCATAGAGATGCTGAGGAAATTGATGGTTCTAACCGTGATGGAGTGGAGATACTGTCATCATAA 1725 0.3901 MENTVTERNVHDASVDYRGRLPLRASTGVWKAALFVLAIEFCERISYFGIASNLISYLTKVMHEDLETATKNVNYWSGTTTLMPLVGGFIADTYTGRFYMILLSSFVYLMGLSLLTMSQFIPSIKPCDTGICKQPRKVHEVFFFFSLYCISLGTGGYKPCLESFGADQFDDGHLEERKKKMSFFNWWNFVLCFALVLSATMIVYVQDFVSWGVAFLIITFLMALTIIAFFVGRPFYRYRRTGRNPLSQILQVLIAAVRKRNLSCPSNPALLYEVPQSERSKDRLLRLTSTLSFLDKAAIIDEEHVEEKNNPWRLATVTRVEETKLIINLVPIWLTSLTVGVCIAQGTTLFVKQAAAMNLKISDNFKIPAASMSSLSAVGILIIVPIYDRIIVPLMRKITGNERGIDILTRISIGMALYVILMIVAALVETKRLRMETDNNSMSVLWLIPQYLILGVGDSFCIVGLQEYFYDQVPHSMKSLGMGLYLSVIGAGYFLSNFFIIIVDHVTGKKGKSWIGKDINSSHLDKFYWLLTIINALNLCLFLFLAKMHTYKTVHRDAEEIDGSNRDGVEILSS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2452 574 Pfam POT family 100 509 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2452 574 PANTHER OS03G0204700 PROTEIN 16 557 - -
Pvu1g2452 574 Gene3D MFS general substrate transporter like domains 2 558 IPR036259 -
Pvu1g2452 574 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2452 574 SUPERFAMILY MFS general substrate transporter 24 562 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2452 Pvu-Chr1 49747293 49749784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2452 7 565 Organic Solute Cotransporters AT3G53960 53.022 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2452 - - gmx:102670061 882.093