Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2449 ATGGAGAACGCAGATCCTAATAGACATTTTCTCAAAGATGTTAAGCGCATCGTTATCAAGGTTGGGACTGCTGTGGTTACTCGCCAAGATGGAAGGGTGGCGGTTGGAAAATTAGGGGCACTATGTGAGCAGATTAAGGAGCTGAACTCTCTTGGTTATGAGATTATTTTGGTGTCATCAGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATACAGAAAATTAATCAACAGCAGCTTTGCTGACCTTCAGAAGCCGCAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAGCAGTCTTATGGCTCTTTATGATGCTTTGTTTAGTCAGCTAGATGTGACATCTGCTCAGCTTCTTGTGACAGACAATGATTTTCGAGACAAAGATTTCAGAAAGCAACTCAGCGAAACTGTGAAATCACTGTTAGGATTAAAAGTTATTCCCATATTTAACGAGAACGATGCAGTTAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGCATATTTTGGGATAATGACAGTTTATCAGCTTTATTGGCATTGGAATTAAAAGCTGATCTTCTTATTTTGTTGAGTGACGTAGAGGGTCTTTATAGTGGCCCTCCGAGTGACCCAGGTTCAAAGCTTATTCATACATACATTAAAGAAATACATCAAAATGAAATTACTTTTGGAGACAAGTCTAGAGTGGGAAGAGGTGGTATGACTGCCAAAGTAAAGGCTTCTATTCATGCAGCTGATGCTGGCATTCCTGTTATCATTACCAGTGGTTATGCAGCAGAAAATATCCTTAATGTTCTCCATGGACAACGTATTGGAACCCTCTTCCATAAAGATGCCCATAAATGGGCCCCAATAAAAGAGTTTGACGCTCGCCAGATGGCAGTTGCAGCTAGGGACTGTTCCAGAAGGCTTCAGGCCATGTCTTCAGAAGAGAGGAAACAAATTTTACTAAAAATAGCTGATGCTTTGGAAGCACATCAAGAAGAGATCAGGATTGAAAATGAAGCTGATGTTGCCTCTGCACAAGAAGAAGGATGTGAAAAATCCTTGGTGGCTAGGCTGGTTTTAAAGAAGGAGAAGCTTGCAAGCCTTGCAAACAACATTCGAATTATTGCAAACATGGAAGATCCAATTGGTCGAGTGCTAAAACGAACCGAGCTCGCAGAAGGGCTGATTTTGGAGAAAACATCATCTCCTTTAGGTGTTCTCTTAATTGTTTTTGAGTCTCGCCCTGAGGCACTAGTGCAGATAGCTTCTTTAGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAAGGAGGCAAGGAGGCTAAGAGATCAAATGCAATTTTGCACAAGGTTATTACTGAAGCCATACCAGATTCTGTCGGTGAAAAACTTATTGGACTTGTGACATCAAGAGCAGAAATTCCTGAGTTACTCAAGTTGGATGATGTAATTGATCTGGTGATTCCAAGAGGCAGCAACAAACTTGTCTCTCAGATCAAGAGTTCGACTAAAATTCCTGTTATGGGTCATGCTGATGGAATTTGTCATGTCTATGTTGATAAATCTGCTGATTTGGAGATGGCAAAGAAGATTGTACTGGATGCAAAAGTAGATTATCCAGCAGGTTGCAATGCCATGGAAACACTTCTTGTTCACAAGGACTTAGTAGAGAAAGGTTGGCTCAATAATATTACTGTTGACCTACGGACAGAAGGTGTTACATTGTTCGGAGGACCGAAGGCAAGTCCGTTGTTAAATATTCCACTGGCTCGTACATTACATCTCGAGTACAATTCATTGACATGCACAGTTGAAATTGTGGATGATGTTTATGCAGCTATTGATCATATAAATCTTTATGGAAGTTCACATACTGATTCCATTGTTACAGAAGATCATGAAGTAGCTGATGTATTTCTACGTCAAGTTGACAGTGCTGCTGTTTTTCACAATGCTAGTACAAGATTCAGTGATGGGGCACGATTTGGTCTAGGGGCAGAGGTGGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCAGTAGGAGTTGATGGATTGTTAACAACCAGATGGATTCTCAAAGGAAGTGGACAGATAGTGGATGGTGACAAAGCAATTACCTACACCCACAAAGACCTTGCTATTTGA 2148 0.4157 MENADPNRHFLKDVKRIVIKVGTAVVTRQDGRVAVGKLGALCEQIKELNSLGYEIILVSSGAVGLGRQRLRYRKLINSSFADLQKPQVELDGKACAAVGQSSLMALYDALFSQLDVTSAQLLVTDNDFRDKDFRKQLSETVKSLLGLKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVEGLYSGPPSDPGSKLIHTYIKEIHQNEITFGDKSRVGRGGMTAKVKASIHAADAGIPVIITSGYAAENILNVLHGQRIGTLFHKDAHKWAPIKEFDARQMAVAARDCSRRLQAMSSEERKQILLKIADALEAHQEEIRIENEADVASAQEEGCEKSLVARLVLKKEKLASLANNIRIIANMEDPIGRVLKRTELAEGLILEKTSSPLGVLLIVFESRPEALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPDSVGEKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVMGHADGICHVYVDKSADLEMAKKIVLDAKVDYPAGCNAMETLLVHKDLVEKGWLNNITVDLRTEGVTLFGGPKASPLLNIPLARTLHLEYNSLTCTVEIVDDVYAAIDHINLYGSSHTDSIVTEDHEVADVFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVDGLLTTRWILKGSGQIVDGDKAITYTHKDLAI* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2449 715 PIRSF P5C_synthetase 1 715 IPR005766 GO:0003824|GO:0006561
Pvu1g2449 715 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Pvu1g2449 715 CDD ALDH_F18-19_ProA-GPR 296 696 IPR000965 GO:0004350|GO:0006561
Pvu1g2449 715 Hamap Glutamate 5-kinase [proB]. 15 284 IPR005715 GO:0005737|GO:0006561
Pvu1g2449 715 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Pvu1g2449 715 Pfam Amino acid kinase family 15 260 IPR001048 -
Pvu1g2449 715 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 698 IPR016162 GO:0016491
Pvu1g2449 715 TIGRFAM proB: glutamate 5-kinase 15 286 IPR005715 GO:0005737|GO:0006561
Pvu1g2449 715 Gene3D - 4 288 IPR036393 -
Pvu1g2449 715 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 607 628 IPR020593 GO:0004350|GO:0006561
Pvu1g2449 715 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 3 714 - -
Pvu1g2449 715 Pfam Aldehyde dehydrogenase family 291 558 IPR015590 GO:0016491
Pvu1g2449 715 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 512 658 IPR016163 GO:0016620
Pvu1g2449 715 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 8 715 IPR005766 GO:0003824|GO:0006561
Pvu1g2449 715 SUPERFAMILY ALDH-like 294 699 IPR016161 GO:0016491
Pvu1g2449 715 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 700 IPR000965 GO:0004350|GO:0006561
Pvu1g2449 715 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Pvu1g2449 715 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Pvu1g2449 715 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Pvu1g2449 715 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Pvu1g2449 715 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Pvu1g2449 715 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 302 689 IPR000965 GO:0004350|GO:0006561
Pvu1g2449 715 CDD AAK_P5CS_ProBA 8 281 IPR041744 -
Pvu1g2449 715 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 3 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2449 Pvu-Chr1 49717585 49723825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2449 K12657 - gmx:548058 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2449 1 49717585 49723825 Pvu1g2449 1 49717585 49723825 ECH
Pvu1g2449 1 49717585 49723825 Pvu8g2382 8 54503014 54510940 ECH
Pvu1g2449 1 49717585 49723825 Pvu8g2382 8 54503014 54510940 PCT