Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2447 ATGGCTCTTTCACCACTCACCATACTTGTGCTCATTGCCACCATCTTCCTCCCATCAATTGCTGTGGCCAGGGACTTTGTAGTTGGGGATGATCATGGATGGACAGAAGGGTTTGATTACTCAACTTGGACTGCAGATAAGACCTTCCAAGTTGGGGACGTACTTGTATTCAAGTATGTTGTTGGAGAACACAATGTGATCAAAGTGAATGGAACTGCATTCCGGAGCTGCACAGTTCCTCCAGAAAGTGAAGTATTGACTACTGGAAATGACCGTATTGTGTTGGCAACTCCTGGGAGAAAATGGTACATATGTGGTGTTACAGGTCACTGCAATGCTGGGCAAAAACTTTTTATTACAGTTCAAGCCCAAACACTGCCTCCAACCCTACCACCTGCCCCTGCACCTTCACCTTTTCAGGATGGACCTGGTTTTGATGGATGGGTGCCTAAGAAGCTATTAACTATATTTCATTAA 477 0.4507 MALSPLTILVLIATIFLPSIAVARDFVVGDDHGWTEGFDYSTWTADKTFQVGDVLVFKYVVGEHNVIKVNGTAFRSCTVPPESEVLTTGNDRIVLATPGRKWYICGVTGHCNAGQKLFITVQAQTLPPTLPPAPAPSPFQDGPGFDGWVPKKLLTIFH* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2447 158 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Pvu1g2447 158 PANTHER BLUE COPPER PROTEIN 8 131 IPR039391 GO:0009055
Pvu1g2447 158 CDD Phytocyanin 24 121 - -
Pvu1g2447 158 PANTHER BLUE COPPER PROTEIN-LIKE 8 131 - -
Pvu1g2447 158 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
Pvu1g2447 158 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Pvu1g2447 158 Gene3D - 22 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2447 Pvu-Chr1 49701557 49702405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2447 1 138 Miscellaneous Gene Families AT2G32300 37.241 7.29e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2447 - - gmx:102668784 242.276