Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2443 ATGACTGGCGATTTTCTCCGGACACCGCTCTCTCTCAAGATCGCCGTCGTCTTCTTCATCGCCGTCACCTTCTTCTACTTCGGCAAACACTGGTCCGATGGCTACCAGCAGCTCGTGTTTTTCAACACTCAACGTTCCGACCCGGATCCGAACACGAGTCCGGTCGTTTCCACGTCGCCGAATTACGCCAAATCCTTTAACCTCTCTGCCCTTATTGACCAGAACAGTACCCAACCGGTGCCGGAAAATGCCCCGCCGCCTCCGCAGCCGGATGCGTCGATCGAGCAACTGGGGATCGTGAACGAGAATGGCACGATGTCCAATGAGTTCGAGGTGGGGGATTTTGAACCGGGTATGGTGGATCAGTGGGTGAACGAGTCCCAGGTTGAGAGGGAAGGCTCTTCTTCTGATTTTGAATTGGTGAAGAAGTTTGGGTTGTGCCCGCGCGAGATGAGAGAGTATATACCTTGTTTGGATAACGAGGACGCGATTCGGAAGCTGCCATCCACCGATAAAGGGGAGAGGTTCGAGCGGCATTGCCCCGAGCAAGGTCAAGGGTTGAATTGCTTGGTTCCTGCTCCCACTGGGTACCGTACTCCTATTCCATGGCCCAGAAGCCGAGATGAGGTATGGTTCTATAATGTTCCTCACACACGTCTTGTTGAGGATAAAGGAGGCCAAAACTGGATTTCTAGAGACAAGGATAAGTTCAAATTCCCGGGAGGTGGCACTCAGTTTATACATGGGGCAAATGAATACTTGGACCATATTTCTAAGATGATTCCTGAAATTACCTTTGGTCGGCATATACGTGTTGTTCTTGATGTTGGTTGCGGCGTTGCTAGTTTTGGTGCATACTTGCTGTCACGGAATGTTGTCCCTATGTCGGTTGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGTGTACCGGCAATGGCAGCAGCATTTGCAACTAGAAGATTGTTATATCCAAGTCAAGCTTTTGACTTGGTACATTGCTCACGCTGTAGAATTAATTGGACTAGAGATGATGGGATACTGCTGCTTGAAGTTAATAGGATGATAAGAGCAGGAGGGTACTTTGTCTGGGCTGCCCAACCAGTTTATAAGCACGAAGAAGCGTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACAGCTCGACTCTGTTGGAATTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCGTTTGACAATAGTTGCTACACAAACCGTGAGGCAGGAACTAAACCTCCATTGTGTGACCCAAGTGATGACCCAGACAGCGTCTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAACGGCTATGGAGCAAATGTCACTGAATGGCCAGCTCGTTTGCAAGCCCCTCCTGACAGGCTTCAAAGCATAAAGCTAGATGCTTTCGAATCCAGATCAGAGCTATTTAAGGCAGAATCTAGATATTGGAAGGAAATAATAGCAAGTTATGTTCGTGCTTTACACTGGAAAAATATCAGACTAAGAAATATTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGAGCAGAATTTTGAAAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGTCCAAACACTCTTCCAGTTATATATGACCGTGGATTGATCGGAGTTATGCATGACTGGTGTGAGGCATTTGACACCTACCCAAGAACCTATGATTTACTGCATGCTGCCAACCTCCTTTCCGTTGAGAGGAAAAGATGCAATGTCTCATCCATTATGCTTGAGATGGATCGGATACTAAGACCTGGTGGACATGTATACATCCGTGATTCTCTTGAAATTATGGACGAACTTCAAGAGATTGCAAAGGCAATAGGCTGGCACGTAATGTTGCGAGACACAGAGGAGGGGCCTCATGCAAGTTATAGGGTATTGGTTGGTGAGAAGCACTTACTACGCTCCTGA 1986 0.4688 MTGDFLRTPLSLKIAVVFFIAVTFFYFGKHWSDGYQQLVFFNTQRSDPDPNTSPVVSTSPNYAKSFNLSALIDQNSTQPVPENAPPPPQPDASIEQLGIVNENGTMSNEFEVGDFEPGMVDQWVNESQVEREGSSSDFELVKKFGLCPREMREYIPCLDNEDAIRKLPSTDKGERFERHCPEQGQGLNCLVPAPTGYRTPIPWPRSRDEVWFYNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHISKMIPEITFGRHIRVVLDVGCGVASFGAYLLSRNVVPMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLVHCSRCRINWTRDDGILLLEVNRMIRAGGYFVWAAQPVYKHEEALEEQWEEMLNLTARLCWNFLKKDGYIAVWQKPFDNSCYTNREAGTKPPLCDPSDDPDSVWYVDLKACISELPKNGYGANVTEWPARLQAPPDRLQSIKLDAFESRSELFKAESRYWKEIIASYVRALHWKNIRLRNIMDMRAGFGGFAAALIEQNFESWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDLLHAANLLSVERKRCNVSSIMLEMDRILRPGGHVYIRDSLEIMDELQEIAKAIGWHVMLRDTEEGPHASYRVLVGEKHLLRS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2443 661 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 153 656 IPR004159 GO:0008168
Pvu1g2443 661 Gene3D Vaccinia Virus protein VP39 250 415 IPR029063 -
Pvu1g2443 661 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 659 IPR004159 GO:0008168
Pvu1g2443 661 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 177 395 IPR029063 -
Pvu1g2443 661 PANTHER METHYLTRANSFERASE PMT12-RELATED 13 659 - -
Pvu1g2443 661 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 493 636 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2443 Pvu-Chr1 49670281 49675366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2443 - - gmx:100800414 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2443 1 49670281 49675366 Pvu1g2443 1 49670281 49675366 ECH
Pvu1g2443 1 49670281 49675366 Pvu8g2389 8 54552101 54557615 PCT