Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2441 ATGAGTACACATAGTATGTTGGATATTGTTTTAAAAGATATACTTCAGGTGGTCACACCATTACAAGAAGATTGGCAGATCCGATTTGCGATTCTTAATGATTTAAGAAGCATTGTTGAATCTGTGGAAAGCTTGAGAGGAGCAACTGTTGAGCCATTTGGGTCATTTGTATCTAATCTCTTCACCCGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTTGCATATTTCATCTGCTGGGAAAAAACAAAAGCAAACTTTATTGGGGGAAGTTTTAAAAGCTTTGAGAATGAAAGGTGCAGGGAGCCACTTGCAGTTCATCTCGAGTGCACGAGTTCCCATTTTAAAATTTAAAAGCAACCGTCAGGGTGTATCTTGTGACATTTCAATCAATAACCTGCCGGGCCAAATGAAATCCAAGATTTTGCTTTGGATCAACAAGATAGATGGCCGCTTTCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAACTGGAACATTCAACTCCTATTCCCTAAGTTTACTTGTCATATTTCATTTTCAGACATGTGTTCCTGCAATCTTACCACCACTCAAATATATATACCCTGGCAACATGGTTGATGATCTTAAAGGCATTAGAGCTGATGCCGAGAATCTTATAGCAGAAACATGTAACGCTGGTATAAACCGGCACATATCAAACACGGCAAGGTCAATTAACAAAAAATCCGTGCCTGATCTTTTTGTTGAATTCTTAAGAAAGTATGCTCAGATGGATTCATGGGCCTCGGAGTTGGGAATTTGCCCGTATACTGGACAATGGGAGCAGATAGAGAACAACACGATTTGGTTACCCAAGACCTACTCTATATTTGTTGAGGATCCCTTTGAGCAGCCACAAAATACTGCAAGATCTGTCAATGCAGGACAACTGAAGAAGATAAGCGACACGTTTTCAAAAACATACGCCTTTCTTTCCTCGAACCATCATAATCTAAATTCACTTTTGACCATGTTAGCACCACCACATGTAGTAAAATCTATCACAACTCCTATCAGAAATTACGATGGAAGTTACTTTCACCCAACTCAGCCAAAAGTGCAGAGAGCCATGCGCCCTCCACTGCAGTTACAGCCTCATTTTCAATATGCTGGTCCAGGAACAAGCTCCAACAGTTCACCTTCAAATGGAAATATGCAGATGCCTAGAGGAACAAACTCTTACATTCCATCTTCAAATGGGCATATACAGATGTCTAGAGGAACAAGCATCAACATCCCATCTTCAAATGGGCATATACCAATGCCTAGAGGAACAAATATCAGCAGTTCATCTTCAAATGGGCATATGCCAATGCCTAGAGGAACAAATATCGGCAGTTCATCTCTAAATGGGCATATACAGAAGCCTAGAGGAACTAAGAAGCCTAGAGGAACAAACTTCAACAGTTCATCTTCAAATGGGCATGTGGTGATGCATAAAGGCCAGCAGATATGGAGGCCAAAGAGTTAA 1530 0.4033 MSTHSMLDIVLKDILQVVTPLQEDWQIRFAILNDLRSIVESVESLRGATVEPFGSFVSNLFTRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGAGSHLQFISSARVPILKFKSNRQGVSCDISINNLPGQMKSKILLWINKIDGRFHDMVLLVKEWAKAHKINNSKTGTFNSYSLSLLVIFHFQTCVPAILPPLKYIYPGNMVDDLKGIRADAENLIAETCNAGINRHISNTARSINKKSVPDLFVEFLRKYAQMDSWASELGICPYTGQWEQIENNTIWLPKTYSIFVEDPFEQPQNTARSVNAGQLKKISDTFSKTYAFLSSNHHNLNSLLTMLAPPHVVKSITTPIRNYDGSYFHPTQPKVQRAMRPPLQLQPHFQYAGPGTSSNSSPSNGNMQMPRGTNSYIPSSNGHIQMSRGTSINIPSSNGHIPMPRGTNISSSSSNGHMPMPRGTNIGSSSLNGHIQKPRGTKKPRGTNFNSSSSNGHVVMHKGQQIWRPKS* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2441 509 MobiDBLite consensus disorder prediction 388 474 - -
Pvu1g2441 509 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Pvu1g2441 509 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 404 - -
Pvu1g2441 509 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 342 - -
Pvu1g2441 509 MobiDBLite consensus disorder prediction 384 509 - -
Pvu1g2441 509 MobiDBLite consensus disorder prediction 481 498 - -
Pvu1g2441 509 CDD NT_PAP_TUTase 27 148 - -
Pvu1g2441 509 Gene3D - 152 328 - -
Pvu1g2441 509 SUPERFAMILY Nucleotidyltransferase 6 147 IPR043519 -
Pvu1g2441 509 Pfam Nucleotidyltransferase domain 36 106 IPR002934 GO:0016779
Pvu1g2441 509 PANTHER PROTEIN HESO1 1 404 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2441 - - pvu:PHAVU_001G236100g 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2441 1 49657295 49665257 Pvu1g2441 1 49657295 49665257 ECH