Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2436 ATGGCTCTTGTTCTCAACGTCTCCTTGTGTTCCACTTCTAAGCCACGTCTTTCTCTCTCAAACTCCAATTTCAAATCTTCCACTCTTCTTCATCTTCCTCTTCCTCTTCCTCTTCTGGGATTCAACGCAAAGCAAAGTCGCCAGCCATCTCAGAAACTCACATTTTCATTGGGTGGCTCCGTGTCTGCTGCCACCCTCGCTGCTCTCCTCTCTGCTTCTTTCATCTTTGTTGATCCCGCACTTGCATTCAGGGGTGGAGGGCCATATGGGCAAGAAGTGACAAGGGGACAAGATCTCACTGGGAAGGACTTCAGTGGCAAGACTCTGATCAAACAAGACTTCAAAACGTCAATACTGAGACAAACCAATTTTAAAGGTGCAAAGTTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATGCTGATCTTCGAAATGCAGATTTTTCCCTGGCTAATGTGACGAAGGCAAACTTAAGCAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACATCTTTTAAGGGATCCAATATCACAGGCGCTGACTTCACGGATGTACCACTAAGAGAAGATCAACGTGAATACCTCTGCAAAGTTGCTGATGGAGTGAACCCAACAACTGGAAATGCCACGCGCGATACATTGTTCTGCAATTAG 678 0.4543 MALVLNVSLCSTSKPRLSLSNSNFKSSTLLHLPLPLPLLGFNAKQSRQPSQKLTFSLGGSVSAATLAALLSASFIFVDPALAFRGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQTNFKGAKLIGASFFDADLTGADLSDADLRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLFCN* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2436 225 SUPERFAMILY Pentapeptide repeat-like 91 195 - -
Pvu1g2436 225 Gene3D - 82 225 - -
Pvu1g2436 225 Pfam Pentapeptide repeats (8 copies) 137 172 IPR001646 -
Pvu1g2436 225 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 15 225 IPR044213 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2436 - - pvu:PHAVU_001G235600g 411.379