Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2433 AACAATGGACTGAATAATGAGCATGCTTTGGCAAGCAGAGAATTGGAAAATGAGAGGCTTAATTCTGCACAGGATGCCCAACCATTATCTACAATCACTGGTTCCGGTACTGCAACTGTTGTGACAGCAAATGTTGTGGATGAAAACACAGTCATTGCTAGCAGTGGCAACAAGACTGAGCCACACGAATTACAGCTCATGACTGATGGAGTTCCTTGTATGGTGGAAATATTTCACTTCTTGTGTTCTCTGCTGAATGTCACTGAGCATATGGGAGTGAATCCTAGATCAAACACAATGACGTTTGATGAAGATGTGCCTCTTTTTGCATTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCATCCTTCCGCCATCACCCAGGACTGCTGAGTTTAATTCAGGATGAATTATTCTACAATCTTATGCAATATGGTTTATCAGTGAGCCCTCTTGTACTTTCAATGGTGTGTAGCATTGTTCTCAATTTATATGAACATCTTCGTCAAGAACTCAAACTACAGCTAGAAGCATTTTTTTCTTGCGTAATTTTGAGGCTTGCACAAAGCAAATATGGTTCCTCATATCAGCAACAGGAGGTTGTGATGGAAGCACTTGTTGATTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATACCAACTTTGACTGTGACATAAGTTACAGTGATGTCTTTGAAGATATTGCAAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAATCCATTGTCTTCCATACACATTCTTGCCTTAGATGGTCTTATTGTTGTAATGCAGGGAATTGCCGAAAGACTGTGTAGTGGATCTTTAAGTTCAGAACAATCTCCTGTAAATTTTGAGGAGTATACACCATTCTGGATGGAAAAGTGTGACAGTTTTGCTGACCCAAATGGTTGGGTTCCTTTTTTCCGCCGAAGAAAGTACATAAAGAGAAAATTAATGATTGGAGCTGATCACTTCAATCGGGATATTAAGAAAGGTCTTGAGTTTCTGCAAGGAGCACATCTTTTGCCTAACAAACCTGATCCCAAAAGTGTTGCCTGCTTTTTAAGATACACAGCTGGGTTGGATAAGAATCTCATTGGTGATTTCCTTGGAAATCATGAAGAATTCTATGTTCAGGTTCTTCATGAATTTGCTAAGACATTTGATTTCCATGATATGACCTTAGACACAGCCCTGCGTGTACTTTTGGAGAGTTTTAGGCTTCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCAGATATCTTAGCTAACAAAGATGCTGCTCTCGTGCTATCATACTCAATTATATTGCTTAATACAGATCATCATAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCGTATTAATGATGGCAATGATCTGCCCCAAGAATTTCTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATTCGCACCACTCTTGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGACGCACAGGGCAAATAAAACTGCTCCATACATTGTATCGGATTCCAGAGCATACTTAGATTATGATATGTTTGTGTTGTTGTCAGGCCCAACAATCGCTGCCATTTCTGTGGTTTTTGATAATGCTGAAAATAAAGAGGTATATCAAAGATGTATGGATGGATTCTTAGTTGCTGCTAAGATATCAGCCTACTATCATCTTGAAAATGTACTTGATGATCTGGTTGTGTGCCTCTGTAAGTTCGTTACCGTTTTGGATCCATTATCGGCTGACGATTCTGTCCTGGCCTTTGGAGATGACACAAAAGTAAGAATTGCAACTGAGACAGTATTCACCATTGCAAATAGGTATGGTGATTACATCCGCACAGGGTGGAGGAATATTCTTGATTGCATTTTAATATTTTACAAGTTAGGCCTCCTTCCTACTCGCTTGGCCAGTGATGCAGCTGACGAGTCACAGGTAACTACAGAAATTGGACATGGAAAATCTAACTCAAATTCTTTATTATCATCTAATCTTCAATATAGTGCTCCAAAGAGATCCTCAGGATTAATTAGCAGGTTTAGTCAACTCTTATCGCTTGGCTCTGAAGAGATACGACCAATACCGACAAAAGAACAGCTGGCTGCTCATCAGCAAGCTACACAAGCAATTCAAAAGTGTCACATTGATAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGAATCTTGAAAGAGCACTCATCAATGCTGGAGCTCAACATCTGAAAGGAAACAGAATGTCTGAGGATGAAGAGTCTTCAGTTTTCTGCCTGGAGTTATTGGTGGCAATCACTCTGAATAACAGGGATAGAGTTATACTTCTTTGGAAGGGTGTTTATGATCACATATCCAATATTATTCAGTCAACTGTGATGCCTTGTGCTCTGGTAGAAAAGGCTATTTTTGGACTTCTTAGAATTTGCCACCGCTTACTTCCCTACAAAGAGAACATTACTGATGAACTTTTGAAGTCCCTGCAACTAGTCTTAAAGCTTGATGCACTAGTTGCAGATGCATATTATGAGCAGATTACACAAGAAGTCGGTTTCCTTGTGAAGGCAAATGCTTCTCATATTAGATCTCAGTCTGGATGGTGGACTATTACTGCTCTGCTCTCAATTACTTCTAGACACCTGGAATCATCTGAGGCTGGATTTGATGCACTGTTGTTCATTATGTCTGATGGAGCTCACTTGCTCCCTGCTAATTACATCCTATGTGTTGATGCTGCGAGACAGTTTGCCGAGTCTCGTGTGGGGCAGGTAGATCGATCTATAATTGCACTGGATCTTATGGTAAGTTCTGTCAATTCCTTAGAAAGATGGTCGAGTAATGCTAAGAAAGCTGCGAAAGAAGAGGAAGTGGAAAAGATGTTACAGGATATTGGGGAAATGTGGTTTAGGCTAGTTCAGGGACTGGGGAAAGTATGTTTGGACCAGAGAGAGGAGGTTAGAAACCATGCATTGTTATCTTTACAGAAGTGCTTAAAAGGAGCTGTTGGGACTCACCTCCCGTGTGATTTGTGGTTGACATGTTTTGATAAAGTGATCTTCATTGTGCTCGAAGACCTGCTTGAAATTGCGGAGTCACATTCTCAAAAGGTGTACCCAAACATGGAAGGAACACTTGTTATTGCCTTGAAGCTTATGTCTGAAGTTTTCCTTCAGTTACTCCAAGAACTATCACAATTGGCGGCCTTCTGCGAACTATGGGAGGGTATGCTAAGCTGTATGGAAAAGTGTGCGAAGATGAAATTTAAAGGAAGAAGAAGTGAGAAGCTTCAAGTGCTTGTGCCTGAGCTTCTGAAGAACACTTTGCTTGTTATGAAATCTCGGGGCATACTAGTGCAGACTAATAATGGTTCGGGAGAAAATAGTTTGTGGGAAGTGACATGGCTATACATGAAGAATATTGCTCCCTCATTGCACTCTGTGGTGTTTCCTGAGCAAGATCCAGAGCAGCTACAACACAAACAGGTTAAAGCAGTTGAAAGTTTGGGACCTGATGCAAACATTTCTGATCCTTCAAATGAAAAAGATGGCCAAGGAGTTGAGATCAGTTAA 3669 0.4034 NNGLNNEHALASRELENERLNSAQDAQPLSTITGSGTATVVTANVVDENTVIASSGNKTEPHELQLMTDGVPCMVEIFHFLCSLLNVTEHMGVNPRSNTMTFDEDVPLFALTLINSAIELGGPSFRHHPGLLSLIQDELFYNLMQYGLSVSPLVLSMVCSIVLNLYEHLRQELKLQLEAFFSCVILRLAQSKYGSSYQQQEVVMEALVDFCRQKTFMVEMYTNFDCDISYSDVFEDIANLLSKSAFPVNNPLSSIHILALDGLIVVMQGIAERLCSGSLSSEQSPVNFEEYTPFWMEKCDSFADPNGWVPFFRRRKYIKRKLMIGADHFNRDIKKGLEFLQGAHLLPNKPDPKSVACFLRYTAGLDKNLIGDFLGNHEEFYVQVLHEFAKTFDFHDMTLDTALRVLLESFRLPGESQKIHRVLEAFSERYYEQSPDILANKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRRINDGNDLPQEFLSEIYHSICKNEIRTTLEPGFGFPEMTPSRWISLTHRANKTAPYIVSDSRAYLDYDMFVLLSGPTIAAISVVFDNAENKEVYQRCMDGFLVAAKISAYYHLENVLDDLVVCLCKFVTVLDPLSADDSVLAFGDDTKVRIATETVFTIANRYGDYIRTGWRNILDCILIFYKLGLLPTRLASDAADESQVTTEIGHGKSNSNSLLSSNLQYSAPKRSSGLISRFSQLLSLGSEEIRPIPTKEQLAAHQQATQAIQKCHIDSIFTESKFLQAESLLNLERALINAGAQHLKGNRMSEDEESSVFCLELLVAITLNNRDRVILLWKGVYDHISNIIQSTVMPCALVEKAIFGLLRICHRLLPYKENITDELLKSLQLVLKLDALVADAYYEQITQEVGFLVKANASHIRSQSGWWTITALLSITSRHLESSEAGFDALLFIMSDGAHLLPANYILCVDAARQFAESRVGQVDRSIIALDLMVSSVNSLERWSSNAKKAAKEEEVEKMLQDIGEMWFRLVQGLGKVCLDQREEVRNHALLSLQKCLKGAVGTHLPCDLWLTCFDKVIFIVLEDLLEIAESHSQKVYPNMEGTLVIALKLMSEVFLQLLQELSQLAAFCELWEGMLSCMEKCAKMKFKGRRSEKLQVLVPELLKNTLLVMKSRGILVQTNNGSGENSLWEVTWLYMKNIAPSLHSVVFPEQDPEQLQHKQVKAVESLGPDANISDPSNEKDGQGVEIS* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2433 1222 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 72 230 IPR032691 -
Pvu1g2433 1222 Coils Coil 1 21 - -
Pvu1g2433 1222 SUPERFAMILY Sec7 domain 316 504 IPR035999 GO:0005085|GO:0032012
Pvu1g2433 1222 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 2 1214 - -
Pvu1g2433 1222 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 2 1214 - -
Pvu1g2433 1222 SMART sec7_5 315 502 IPR000904 GO:0005085|GO:0032012
Pvu1g2433 1222 ProSiteProfiles SEC7 domain profile. 311 500 IPR000904 GO:0005085|GO:0032012
Pvu1g2433 1222 CDD Sec7 319 502 IPR000904 GO:0005085|GO:0032012
Pvu1g2433 1222 MobiDBLite consensus disorder prediction 1188 1222 - -
Pvu1g2433 1222 Gene3D - 395 509 IPR023394 -
Pvu1g2433 1222 Pfam Sec7 domain 319 502 IPR000904 GO:0005085|GO:0032012
Pvu1g2433 1222 Gene3D - 312 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2433 Pvu-Chr1 49599450 49603460 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2433 K18443 - gmx:100802024 1983.38