Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2426 CATGCTGTGGTGGAGGAACTGGCGGAGTTTGGTGCAACTGTGTACACTTGTTCCAGGAATGAAGAGGAGCTGAATGCATGCTTAAAGGAATGGAAAGAGAAGGGGTTTTCGGTTTCTGGGTCGGTTTGTGATGTGTCTTTTCCAGCCCAAAGAGAGAATCTCATCAAAGAAGTGGCCTCTGCCTTCAACGGCATGCTCAACATACTT 207 0.4783 HAVVEELAEFGATVYTCSRNEEELNACLKEWKEKGFSVSGSVCDVSFPAQRENLIKEVASAFNGMLNIL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2426 69 Pfam short chain dehydrogenase 2 69 IPR002347 -
Pvu1g2426 69 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 69 - -
Pvu1g2426 69 PANTHER TROPINONE REDUCTASE 1 69 IPR045000 GO:0016491
Pvu1g2426 69 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 69 IPR036291 -
Pvu1g2426 69 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2426 Pvu-Chr1 49558583 49558789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2426 1 69 Miscellaneous Gene Families AT1G07440 57.971 1.85e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2426 K08081 - pvu:PHAVU_001G2347000 141.739