Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2425 GTAAACAATGTTGCAACAAATGTGAGGAGGCCAACAATAGAGTATACAACCGAAGAATATTCAAAATTGATGGCAACTAACTTGGACCCTGCATACCATCTGTGCCAACTTGCATATCCTCTTCTGAAAGAATCTGGAAATGGAAGTATTGTGTCCATTTCCTCCGTTGCAGGTCAGACAAGTCTAGGTACTGGAGTCATTTATGCAGCAGCTAAAGCTGCAATGGATCAGATTACCAAATATCTTGCATGTGAATGGGCGAAAGACAATATTAGGAGCAACAGTGTTGCACCCTGGTATACCAAAACATCACTTGCGGAATCTGTGCTTGCAATCAAAGAATATGTTGACGAGATAATGATTCGTACGCCAATAAAGCGAATTGCAGAAGCACATGAAGTGTCATCCTTGGTGACTTTCCTTTGCTTGCCAGCAGCTTCTTACATCACTGGACAGGTTATTTCTGTTGATGGAGGATTTACTGTCCATGGATTTCAACCCAGCGTGTTGATTACTTGA 519 0.4181 VNNVATNVRRPTIEYTTEEYSKLMATNLDPAYHLCQLAYPLLKESGNGSIVSISSVAGQTSLGTGVIYAAAKAAMDQITKYLACEWAKDNIRSNSVAPWYTKTSLAESVLAIKEYVDEIMIRTPIKRIAEAHEVSSLVTFLCLPAASYITGQVISVDGGFTVHGFQPSVLIT* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2425 172 Gene3D - 1 168 - -
Pvu1g2425 172 PANTHER TROPINONE REDUCTASE 1 168 IPR045000 GO:0016491
Pvu1g2425 172 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 1 168 - -
Pvu1g2425 172 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 163 IPR036291 -
Pvu1g2425 172 PRINTS Glucose/ribitol dehydrogenase family signature 42 58 IPR002347 -
Pvu1g2425 172 PRINTS Glucose/ribitol dehydrogenase family signature 68 87 IPR002347 -
Pvu1g2425 172 PRINTS Glucose/ribitol dehydrogenase family signature 89 106 IPR002347 -
Pvu1g2425 172 PRINTS Glucose/ribitol dehydrogenase family signature 124 144 IPR002347 -
Pvu1g2425 172 Pfam Enoyl-(Acyl carrier protein) reductase 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2425 Pvu-Chr1 49556547 49557496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2425 1 167 Miscellaneous Gene Families AT2G29290 60.355 8.61e-71 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2425 K08081 - gmx:100819646 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1205 8 14428911 14429453 Pvu1g2425 1 49556547 49557496 ECH
Pvu1g2425 1 49556547 49557496 Pvu1g2425 1 49556547 49557496 ECH