Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2423 ATGGCGGCTGTCACGGAATTTGGGGTGTCTCAATTGCTGCAGGGTACTTCAAGGCAGACATTGTTCTTGAAGAAGAAGCCTCAGAAACATAGAAGTCACATGCTTTGGGGTACGCTTTGGAATAGGAATTGGGCTTTGGGATCAACTCGAAGAGCTTTGTCTTTAAGGTGTCACGCTCAAGAAAATCCCAGAGCAGTTGTAGAAGAGCAACCTGGCTTGGTTGAGATGCCTGCCTCGGAGGTTGTTCATTTATTCCGGGTACCGTTTATGCAAAAAAGTGCAGCTGCTGAGCTTTTAAAGGATGCTCAGGTGAAAATCTGTAGTCAGATCGTGGAAATACAAACGGAGCAATGTTATAATGTTGGCCTTAGTTCACAACTTTCGAGTGAAAAAATTTCTGTCCTTAAATGGCTTCTTGAAGAAACATTTGAGCCCGAGAATCTGGGAAATGAGAGCTTTCTTGAGAAGAAGAGGAAGGAGGGATTGACTCCAGTTATAGTCGAGGTTGGTCCCAGGTTGTCATTTACCACAGCTTGGTCTACTAATGCTGTGGCAATTTGCCATGCTTGTGGATTGACGGAAGTCACCCGTTTGGAACGGTCAAGGAGGTACTTGTTGTTCACCACAAGTGCACTGCAAGATAATCAAATAAATGAATTTGCATTTATGGTGCATGATAGAATGACTGAATGTGTTTATAGTCAGAAGTTAACATCCTTTGAGACTAGTATTGTTCCCGAGGAGATTCGTTATATACCTGTTATGGAGAGGGGACGGAAGGCATTAGAAGAGATTAATTTAGAGATGGGTTTTGCCTTTGATGACCAGGATTTAGAATTCTACACCAAACTTTTCAGAGAAGACATTAAGCGTAACCCGACAAATGTGGAGTTGTTTGATATTGCGCAATCCAACAGTGAGCATAGCAGACATTGGTTTTTTACTGGAAACATTTTCATTGATGGACAACTTATGAATAAGACTCTAATGCAAATTGTGAAAAGTACTCTGCAGGCAAATCCAAATAACTCAGTTATTGGGTTTAAGGATAACTCAAGTGCTATAAGGGGTTTCCCTGTAAAGCAGCTCCGACCAGTTCAGCCTGGCTCCTCATGTCCATTAGAAATTGCAGTAAGTGAGTTAGATATACTATTTACAGCTGAAACACATAATTTTCCATGCGCAGTGGCACCTTATCCTGGTGCAGAGACGGGTGCAGGAGGTCGCATTAGGGATACACATGCTACTGGAAGGGGCTCCTTTGTCCAGGCAGCTACAGCTGGTTATTGTGTTGGGAATCTCAACACGTCAGGCTTTTATGCTCCATGGGAAGATCCCTCCTTTACTTATCCATCGAATTTGGCACCACCTTTACAGATTCTTATAGATTCTAGTAACGGCGCATCTGATTATGGGAACAAATTTGGAGAGCCATTGATCCAGGGTTTCTGCAGAACTTTTGGAATGAGACTTCCTAGCGGGGAGAGGCGAGAATGGTTGAAGCCAATCATGTTCAGTGCAGGCATTGGACAGATAGACCACCTTCATATAACAAAGGGAGAACCTGACATTGGGATGCTGGTTGTCAAGATTGGAGGCCCAGCTTATCGCATTGGTATGGGAGGTGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATGATGCAGAGCTTGATTTCAATGCTGTGCAACGTGGGGATGCTGAGATGGCTCAAAAACTATATCGTCTTGTTCGGGCCTGTATTGAGATGGGGGATAAAAACCCAATAATCAGCATTCATGATCAGGGTGCTGGTGGGAACTGCAATGTTGTGAAGGAAATTATATATCCAAAGGGTGCTGAGATAGATGTCCGAGCAATTGTTGTTGGTGATCATACAATGTCTGTTCTAGAAATTTGGGGGGCAGAGTATCAGGAGCAGGATGCAATCTTGGTGAAGCCTGAAAGTCGTGATCTCTTGGAATCAATCTGTAGCAGGGAAAAAGTTTCAATGGCTGTTATTGGAACTATTAGTGGTGATGGACGTGTTGTGTTAGTCGATCGCTTAGCAACCCAACAGTGTATTTCAAATGGACTTCCTCCACCTCCGCCTGCAGTTGATCTTGAATTGGAGAAAGTCCTTGGTAACATGCCTAAAAAGTCTTTTCACTTTAATCGGGTGGTCTATGAGCGGGAGCCACTTGATATTGCCCCTGGGATTACAGTGATAGATTCTTTGAAGAGAGTGTTGAGTTTACCATCTGTCTGTTCAAAACGTTTCTTAACAACAAAAGTTGATAGGTGTGTTACTGGTCTAGTTGCTCAGCAGCAAACTGTTGGTCCTTTGCAGATTCCCCTTGCCGATGTTGCTGTTACAGCTCAAACTTTTACTGATTTGACTGGAGGTGCTTGTGCCATTGGGGAACAGCCAATTAAAGGCTTGTTAGACCCCAAAGCAATGGCTCGGTTGGCTGTTGGAGAAGCACTAACAAATCTTGTATGGGCGAAGGTCACTTCCCTTTCTGATGTCAAGGCTAGTGGTAATTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTGACATGTATGATGCTGCCATATCTTTATCTGAAGCAATGATTGAACTTGGCATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCATTCTGATGGAGAAGTTGTCAAGGCTCCTGGAAATCTTGTTATCAGTGTTTATGTTACCTGTGCTGATATAACAAAAACAGTGACTCCAGACTTAAAACTTAAGGATGAAGGTGTTTTGCTTCATATTGATTTGTCAAAAGGTCAGAGGCGGTTAGGTGGATCTGCTTTTGCCCAGGCGTTTGACCAAGTTGGGGATGAGTGCCCTGATCTTGATGACGTTCCTTACCTTAAAAAGGTCTTTGAAGGTGTTCAAGATCTTCTTACTGATGAACTGATCTCTGCTGGCCATGATATCAGCGATGGTGGGCTGCTTGTTTGTGCCTTAGAGATGGCATTTGCTGGTAATTGCGGACTTAATTTGGACATGACATCTCAAGGTAACAGCCTCTTCCAAACACTCTATGCTGAAGAGCTTGGGTTAGTTCTTGAGGTAAGCAAGAAAAATCTGACTTTGGTAATGGACAAATTGATCAATGTGGGAGTTTCAGCTGAAATCATTGGTCAAGTAACTGCCAGTCCATCAATAGAAGTTAAGGTTGATGGGGAGGTTTTCTTAACAGAAAAAACTAGCACTCTAAGGGACATGTGGGAAGAGACCAGTTTTCAGCTGGAAAGGTTCCAAAGACTGGCATCTTGTGTGGATATGGAGAAAGAAGGACTAAAACATCGATATGAACCCTCATGGGATCTGACCTATCTTCCTGTCTTCACTGAGGAAAAGTTTTTGTCTGCAACTGTGAAACCTAAAGTGGCTGTGATTAGAGAAGAAGGAAGCAATGGAGACCGAGAAATGGCTGCAGCATTTTATGCTGCTGGTTTTGAGCCATGGGATGTTACTATGTCAGACCTTCTCAATCGAAAGACGTCTTTGCAAGAGTTTCGTGGAATTGTGTTTGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAAAGGTTGGTCTGCTTGCATAAGATTCAATGAGCATGTTTTGCAGCAATTTCAGGAGTTTTACAAGCGACCGGACACTTTTAGTCTAGGTGTATGCAACGGGTGTCAGCTAATGGCTTTGTTGGGGTGGGTACCTGGGCCACAAATTGGGGGTGTGCATGGTGCTGGTGGTGACCTATCACAACCAAGGTTCATTCATAACGCGTCAGGGCGGTTTGAATGCCGCTTTACAAGTGTTACCATACTGCCCTCACCAGCTATGATGTTCAGGGGCATGGAAGGTAGCACAATGGGTATATGGGCTGCTCATGGTGAAGGAAGAGCTTACTTTCCAGACGAAGGTGTATTTGACCGAATAGTTCATTCTGAGTTAGCTCCTGTAAGATATTGTGATGATGCTGGGAATCCAACTGAGGCCTACCCTTTCAATGTGAATGGCTCTCCTTTAGGGGCTGCAGCTATTTGTTCCCCAGATGGGAGACATCTTGCCATGATGCCTCATCCAGAACGTTGCTTCTTAATGTGGCAGTTCCCATGGTATCCAAAGCACTGGCATGTAGAGAAGAATGGGCCTAGTCCTTGGTTGCGCATGTTCCAGAATGCGAGAGAGTGGTGTTCCTGA 4209 0.4431 MAAVTEFGVSQLLQGTSRQTLFLKKKPQKHRSHMLWGTLWNRNWALGSTRRALSLRCHAQENPRAVVEEQPGLVEMPASEVVHLFRVPFMQKSAAAELLKDAQVKICSQIVEIQTEQCYNVGLSSQLSSEKISVLKWLLEETFEPENLGNESFLEKKRKEGLTPVIVEVGPRLSFTTAWSTNAVAICHACGLTEVTRLERSRRYLLFTTSALQDNQINEFAFMVHDRMTECVYSQKLTSFETSIVPEEIRYIPVMERGRKALEEINLEMGFAFDDQDLEFYTKLFREDIKRNPTNVELFDIAQSNSEHSRHWFFTGNIFIDGQLMNKTLMQIVKSTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVQPGSSCPLEIAVSELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNTSGFYAPWEDPSFTYPSNLAPPLQILIDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHLHITKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRLVRACIEMGDKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDVRAIVVGDHTMSVLEIWGAEYQEQDAILVKPESRDLLESICSREKVSMAVIGTISGDGRVVLVDRLATQQCISNGLPPPPPAVDLELEKVLGNMPKKSFHFNRVVYEREPLDIAPGITVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGADMYDAAISLSEAMIELGIAIDGGKDSLSMAAHSDGEVVKAPGNLVISVYVTCADITKTVTPDLKLKDEGVLLHIDLSKGQRRLGGSAFAQAFDQVGDECPDLDDVPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNCGLNLDMTSQGNSLFQTLYAEELGLVLEVSKKNLTLVMDKLINVGVSAEIIGQVTASPSIEVKVDGEVFLTEKTSTLRDMWEETSFQLERFQRLASCVDMEKEGLKHRYEPSWDLTYLPVFTEEKFLSATVKPKVAVIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNRKTSLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEHVLQQFQEFYKRPDTFSLGVCNGCQLMALLGWVPGPQIGGVHGAGGDLSQPRFIHNASGRFECRFTSVTILPSPAMMFRGMEGSTMGIWAAHGEGRAYFPDEGVFDRIVHSELAPVRYCDDAGNPTEAYPFNVNGSPLGAAAICSPDGRHLAMMPHPERCFLMWQFPWYPKHWHVEKNGPSPWLRMFQNAREWCS* 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2423 1402 SUPERFAMILY PurM N-terminal domain-like 732 913 IPR036921 -
Pvu1g2423 1402 CDD GATase1_FGAR_AT 1135 1398 - -
Pvu1g2423 1402 Gene3D - 909 1076 IPR036676 -
Pvu1g2423 1402 Gene3D - 512 687 IPR036676 -
Pvu1g2423 1402 Pfam CobB/CobQ-like glutamine amidotransferase domain 1132 1401 - -
Pvu1g2423 1402 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 245 305 - -
Pvu1g2423 1402 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 117 236 IPR040707 -
Pvu1g2423 1402 SMART GATase_5_2 1132 1401 - -
Pvu1g2423 1402 SUPERFAMILY PurM C-terminal domain-like 920 1112 IPR036676 -
Pvu1g2423 1402 Pfam AIR synthase related protein, C-terminal domain 934 1064 IPR010918 -
Pvu1g2423 1402 Pfam AIR synthase related protein, C-terminal domain 525 679 IPR010918 -
Pvu1g2423 1402 SUPERFAMILY Class I glutamine amidotransferase-like 1130 1401 IPR029062 -
Pvu1g2423 1402 SUPERFAMILY FGAM synthase PurL, linker domain 245 312 - -
Pvu1g2423 1402 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1134 1378 - -
Pvu1g2423 1402 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 85 1400 IPR010073 GO:0004642|GO:0006189
Pvu1g2423 1402 CDD PurL_repeat2 781 1054 - -
Pvu1g2423 1402 Gene3D - 1077 1402 IPR029062 -
Pvu1g2423 1402 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 55 1401 - -
Pvu1g2423 1402 SUPERFAMILY PurM C-terminal domain-like 522 756 IPR036676 -
Pvu1g2423 1402 SUPERFAMILY PurM N-terminal domain-like 313 520 IPR036921 -
Pvu1g2423 1402 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 81 1402 IPR010073 GO:0004642|GO:0006189
Pvu1g2423 1402 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 262 311 IPR041609 -
Pvu1g2423 1402 Gene3D - 306 511 IPR036921 -
Pvu1g2423 1402 PANTHER - 55 1401 - -
Pvu1g2423 1402 CDD PurL_repeat1 297 681 - -
Pvu1g2423 1402 SUPERFAMILY PurS-like 83 240 IPR036604 -
Pvu1g2423 1402 Gene3D - 721 908 IPR036921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2423 Pvu-Chr1 49535272 49540467 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2423 K01952 - gmx:100818572 2601.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2423 1 49535272 49540467 Pvu1g2423 1 49535272 49540467 ECH