Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2419 ATGCATGCATGGATTGTGAGAGAGGGAAGAAGATCAGAACCTGTGTGGGAGATGGAGATTAGAAAGCAGAAGAGAAGGAAAGGATGGGCACGAATATCGGTTTTCTCATTATTTGTTGGAAAACAAACCGGTCCGGCCAGCTACCTTTTACCGCCGAAACCGGATCTATTCGAAGCGAAGCCAACTCAACCGGACCCCTCTCTCTATGCCCTAACCGGTCTGTCCGGTCACATCTCCACGGTTCTCTTGGCTTCTCTCTTGGAGTCGGTTCATTCTCTCTTCCTATTCCTCTCTTCTCTTCCAATAATAAAAAAAAGCGATTCATCAAACCGGGGAAAAATGGGTTCGAATCTGGAACCGGTGCCAATTACATCCCAGAAACATGACCCGGCATGGAAACATGTTCAGATGTATAAGAATGGGGACAAGGTGCAGCTGAAGTGCATATATTGTCAGAAGATGTTCAAGGGTGGTGGGATTCATAGGATTAAGGAACACCTAGCTTGCCAGAAAGGGAATGCATCCACTTGCAGCCGTGTCCCCCATGATGTCAGGCTTCACATGCAGCAGAGTTTGGATGGGGTTGTGGTGAAGAAGAGGAGGAAGCAGAAGATCGAGGAGGAGATTATGAGTGTTAATCCTTTGACCACTGTTGTGAACTCGCTTCCCAATAATAACCAGGTTGATGTCAATCAGGGGCTGCAGGCCATTGGAGTGGACCACAATTCAAGTTTGGTAGTGAATCCTGGTGAAGGAATGAGTAAGAATATGGAAAGGAGGAAGAAGATGAGAGCTAGTAAGAATCCTGCAGCAATTTATGCAAATTCGGAGGGTGTTGTTGCTGTGGAGAAGAATGGATTGTTTCCCAAAAGGGTGGACAATCACATTCATATGGCGATTGGTCGGTTTTTGTATGACATTGGTGCACCTTTTGATGCCGTGAACTCAGTCTATTTTCATGAAATGGTTGATGCAATTTCTTCAAGGGGGGCGGGTTTCGAGCGGCCCTCGCATCATGAACTTCGGGGTTGGATCCTGAAGAACTCTGTGGAGGAAGTGAAGAATGATATAGATAGATGCAAGATGACTTGGGGTAGGACTGGCTGTTCCATTTTGGTTGATCAATGGGCAACAGAAACTGGGAGAGTACTGATAAGCTTTTTGGCTTATTGTCCTGAAGGCGTTGTCTTTTTGAAATCTATGGATGCGACTGAGATTTCAACTTCTGCAGATTTTCTGTATGACATGATAAAACAAGTAGTAGATGAAGTTGGAGTCGGGCAAGTGCTGCAAGTGATTACGTCTGGTGAAGAACAATATGCTGTTGCTGGTAGACGGCTGACCGACACTTTTCCCACCCTTTATTGGAGCCCTTCTGCTGCTCATTGCATTGATTTCATACTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCAGTGATTGAACAAGCTAAATCTGTAACAAGATTTGTGTACAATTACAGTGCAATTTTGATTATGGTTAAAAGGTATACGTTAGGGAATGATATTGTGGATCCATCTTTTTCACAATTTGCAACAAACTTTACCACATTGAAACGGATGGTTGATCTTAAACACAATTTACAGGCCTTGGTGACTTCTCAGGAGTGGGCAGATTGCCCATATTCAAAGAAATCAGCAGGGCTTGAAATGTTAGATTGCCTAAGCAGTCAAACATTTTGGTCCTCGTGTGACATGATTGTTCGTCTAACAGCCCCTCTCTTAAAAGTTCTGAGAATAGCTAGTAGTGAGATGAGACCTGCAATGGGATACATTTATGCTGGAATATACCGGGCAAAAGAAGCAATTAAAAAAGCTCTCGGTAAGAGGGAGGAATACATGGTGTACTGGAATATTATACATCATAGATGGGAAAGGCTGTGGCATCATCCTCTTCACGCTGCTGGATTCTACCTTAATCCAAAGTTCTTCTATAGTATTCAAGGAGATATTCACAGTCAGATTGTCTCAGGAATGTTTGACTGCATAGAGAGATTGGTATCTGATACAAGAATCCAAGATAAAATTATCAAAGAGATAAACTTGTATAAGTCTGCTGCAGGTGACTTTGGGAGAAAGATGGCAGTGAGAGCAAGAGATAATCTGCTTCCTTCTGAATGGTGGTCAACATATGGAGGAGGCTGCCCTAACTTATCACGGTTAGCAATTCGTATTCTCAGCCAAACATCCAGTGTGATGTCCTGCAAGAGAAACCAGATTCCTTTTGAACAAATAGTCAACACAAGGAATTATATAGAGCGCCAACACCTTACCGATCTTGTCTTTGTTCACTGCAATTTACGATTAAGACAAATGTTTACGAGCAAAGATCAAGATTTTAGTGATCCCCTATCATTTGACACCATTAGTTATGTTGATGAGTGGATTAGGCCAAGGGATTTATACATAGACGAGTATGGGAACTCAGATTGGATGGCATTGGATCCATCTTCAGTTAACACAATGCTTTTAAGGCCTTTAAATGATGAAGCTGAAGAATTGGATGAAGGGTTTGATGATGATGAAATTTTCAGTTGTGGAAAAGATAGTGAGGATGAAAACACTGTTGAAAAGTTGGTAAACCAATAG 2610 0.4245 MHAWIVREGRRSEPVWEMEIRKQKRRKGWARISVFSLFVGKQTGPASYLLPPKPDLFEAKPTQPDPSLYALTGLSGHISTVLLASLLESVHSLFLFLSSLPIIKKSDSSNRGKMGSNLEPVPITSQKHDPAWKHVQMYKNGDKVQLKCIYCQKMFKGGGIHRIKEHLACQKGNASTCSRVPHDVRLHMQQSLDGVVVKKRRKQKIEEEIMSVNPLTTVVNSLPNNNQVDVNQGLQAIGVDHNSSLVVNPGEGMSKNMERRKKMRASKNPAAIYANSEGVVAVEKNGLFPKRVDNHIHMAIGRFLYDIGAPFDAVNSVYFHEMVDAISSRGAGFERPSHHELRGWILKNSVEEVKNDIDRCKMTWGRTGCSILVDQWATETGRVLISFLAYCPEGVVFLKSMDATEISTSADFLYDMIKQVVDEVGVGQVLQVITSGEEQYAVAGRRLTDTFPTLYWSPSAAHCIDFILEDFGNLEWISAVIEQAKSVTRFVYNYSAILIMVKRYTLGNDIVDPSFSQFATNFTTLKRMVDLKHNLQALVTSQEWADCPYSKKSAGLEMLDCLSSQTFWSSCDMIVRLTAPLLKVLRIASSEMRPAMGYIYAGIYRAKEAIKKALGKREEYMVYWNIIHHRWERLWHHPLHAAGFYLNPKFFYSIQGDIHSQIVSGMFDCIERLVSDTRIQDKIIKEINLYKSAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQIPFEQIVNTRNYIERQHLTDLVFVHCNLRLRQMFTSKDQDFSDPLSFDTISYVDEWIRPRDLYIDEYGNSDWMALDPSSVNTMLLRPLNDEAEELDEGFDDDEIFSCGKDSEDENTVEKLVNQ* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2419 869 MobiDBLite consensus disorder prediction 849 863 - -
Pvu1g2419 869 MobiDBLite consensus disorder prediction 849 869 - -
Pvu1g2419 869 SUPERFAMILY Ribonuclease H-like 369 776 IPR012337 -
Pvu1g2419 869 Pfam hAT family C-terminal dimerisation region 695 773 IPR008906 GO:0046983
Pvu1g2419 869 PANTHER OSJNBA0013A04.12 PROTEIN 99 843 - -
Pvu1g2419 869 ProSiteProfiles Zinc finger BED-type profile. 126 184 IPR003656 GO:0003677
Pvu1g2419 869 Pfam Protein of unknown function (DUF 659) 336 487 IPR007021 -
Pvu1g2419 869 Pfam BED zinc finger 129 169 IPR003656 GO:0003677
Pvu1g2419 869 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 99 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2419 Pvu-Chr1 49517760 49522668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2419 - - gmx:100817502 1422.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2419 1 49517760 49522668 Pvu1g2419 1 49517760 49522668 ECH