Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2417 ATGGCTTCAAATTCCTTGGACATGAACCCCTCTTGGACAAGATTGCAGAACAAACAATTTGAGAAGGCACTGGTCTTGTACGATGAAGACACACCAGATCGGTGGCATCATATAGCGAAGGATGTTGGTGATAAATCAGTGGAGGAAGTGAAGAGACACTACGCAATTCTTTTAGAAGATGTTAGTAGAATAGAGTCAGGGCATATTCCAATTCCCCAATACAAGTTCTCTGAAAACATGCATGGATGA 249 0.4177 MASNSLDMNPSWTRLQNKQFEKALVLYDEDTPDRWHHIAKDVGDKSVEEVKRHYAILLEDVSRIESGHIPIPQYKFSENMHG* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2417 82 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pvu1g2417 82 SMART sant 8 60 IPR001005 -
Pvu1g2417 82 CDD SANT 11 54 IPR001005 -
Pvu1g2417 82 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 77 IPR044636 GO:0003700
Pvu1g2417 82 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Pvu1g2417 82 Gene3D - 7 71 - -
Pvu1g2417 82 PANTHER PROTEIN RADIALIS-LIKE 3 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2417 Pvu-Chr1 49516202 49516450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2417 - - gmx:100785957 130.183