Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2403 ATGCCCGAGATGGAAGAGGGCGAGGATATAGAGCAACCTCTAACGGCCATAGCAGAGGCGTTTGAGGAATTGTCTAAGTGGAGGAAGAAGGAGGTGCACCACATTCGTCTCGACACGTTCTGCGAAGCCGCCTCTCTGGTCTCCGTTCTCTTCCGGTGTCTAGGCCTGGCTTTTAAATTCGCCGAATTGGAATACATGGCGAAGCTACAAGGTCTCGTGGAAGCATCAAAGACATGTCCGACGCTAGAGGATATCCTCGTGCTTGATGTTGCCAGTGATACCGTTAAAACATCTGGAAGCTGTTCACGTAATCTGCGTAGGGTTCGGCAGGGTCTGGATCTTGTGAGAGCTATATTCGAACAGCTTCTATCCAGCGACGATACTTCTCTGAAAGAAGTCGCTTCAACGGCTTATGGACAGGTTTGTGCTCCCTATCACACCTGGGCGGTTCGAACAGCCGTGTACGCAGGGATGTATACACTTCCAAGCAGAGAACAACTTTTGATGAAGCTGAATGAAACAGAGCAATCCGCAGAGAAGAAGATGAAAAGGTACATTGCTGCCTCACATCCCATTATAGAATACATTGATAAACTCTATCTTTCTCGAAACATCACGTTGGATTGGTGA 630 0.4825 MPEMEEGEDIEQPLTAIAEAFEELSKWRKKEVHHIRLDTFCEAASLVSVLFRCLGLAFKFAELEYMAKLQGLVEASKTCPTLEDILVLDVASDTVKTSGSCSRNLRRVRQGLDLVRAIFEQLLSSDDTSLKEVASTAYGQVCAPYHTWAVRTAVYAGMYTLPSREQLLMKLNETEQSAEKKMKRYIAASHPIIEYIDKLYLSRNITLDW* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2403 209 Coils Coil 164 188 - -
Pvu1g2403 209 Gene3D Glycolipid transfer protein 5 209 IPR036497 -
Pvu1g2403 209 PANTHER ACD11 HOMOLOG PROTEIN 8 209 - -
Pvu1g2403 209 SUPERFAMILY Glycolipid transfer protein, GLTP 33 208 IPR036497 -
Pvu1g2403 209 Pfam Glycolipid transfer protein (GLTP) 35 173 IPR014830 GO:0005737|GO:0120009|GO:0120013
Pvu1g2403 209 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 8 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2403 Pvu-Chr1 49333070 49334063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2403 10 209 Acyl Lipid Metabolism Gene Families AT4G39670 66.505 1.04e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2403 - - gmx:100813626 341.658