Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2396 ATGGCTTCTCCCACACTGAGTCTGAGGCCTCAAAACCCTACAATACTGTTGTTCCTTATATGCATTTCATTTTCATATTCGGTTCAAGAAGTCATAGTATCTTCTAAGAAGTTAGACTTAGACCAGCCACTGTTTCCGCCACCAGCGGAGACTGAAATCAAGTGTGGATCATGTCCTTGTGGAGACACCTGTGGTGAGCAACTTCCACCACCCCCGCCACCAACTCCACCTCCTTGTCCATCTCCGCCGCCACCACCACCTCCACCTCCACCACCACCGTCGCCACCTCCTCCTCCTAAGTTTCCCACATGTCCTCAGAACTGCAACCCCTTGCGACCACCACCACCACCAAGATTCGTATACGTGCCTGTGCCAGGTGTTCCAAAACCAAATACTTGGGTATATTATTACTCTGGTGCTGAAAACAGAGCTGTGGGATTGCTTGTTTTGGCTGGTTTGGGAGGACTATCATTGGCAACGCTACTTTTGGATGACATCATGAAGCTAAATCTGTACTTCTGA 522 0.4923 MASPTLSLRPQNPTILLFLICISFSYSVQEVIVSSKKLDLDQPLFPPPAETEIKCGSCPCGDTCGEQLPPPPPPTPPPCPSPPPPPPPPPPPPSPPPPPKFPTCPQNCNPLRPPPPPRFVYVPVPGVPKPNTWVYYYSGAENRAVGLLVLAGLGGLSLATLLLDDIMKLNLYF* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2396 173 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 1 166 - -
Pvu1g2396 173 MobiDBLite consensus disorder prediction 66 107 - -
Pvu1g2396 173 PANTHER PROTEIN, PUTATIVE-RELATED 1 166 - -
Pvu1g2396 173 PRINTS Proline rich extensin signature 1 13 - -
Pvu1g2396 173 PRINTS Proline rich extensin signature 67 83 - -
Pvu1g2396 173 PRINTS Proline rich extensin signature 85 102 - -
Pvu1g2396 173 PRINTS Proline rich extensin signature 105 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2396 Pvu-Chr1 49288690 49289211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2396 - - gmx:102666273 174.481