Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2387 ATGAAGATCTTAGAGGCCAATGCTGGTGCACTCACAAATTTTGAGGTCCTTGATTTCTTACGAGCTAAAGGAGCTTCAAAGGATCCAACCAGGGTTATTGCCAAAGTGGAGCAGTCTGAATACAAGGTTTATGATTATTTGGTTGACACTGCTGCCTCTGATCAAACAAGAGAGAGCATCAATGAGTTTTTGACTTGTATTAAACGACATGACCTAGCAAAAGCTGAGGTTCTGAACATATTAAACACTAGGCCAACTTCTGAAGTTGAAATATTCCCTATCATAGAAAGTTGTGAGGGACGTTTTCCAGATGAAGAGGTGACCGAAATAGTGGAGCTGGTGACGAAAACATTGCCGCCACCTCCCGAAATGAAACAGGAAGAAATTACCAAGGATGACGAAGAAACTGCTACACTGAAAAATGAAAAGGAAGAGATTAGTGAAGATCCAATGGACACCAGATAA 465 0.4108 MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVEQSEYKVYDYLVDTAASDQTRESINEFLTCIKRHDLAKAEVLNILNTRPTSEVEIFPIIESCEGRFPDEEVTEIVELVTKTLPPPPEMKQEEITKDDEETATLKNEKEEISEDPMDTR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2387 154 SMART rpol4neu2 1 121 IPR006590 -
Pvu1g2387 154 MobiDBLite consensus disorder prediction 125 154 - -
Pvu1g2387 154 Gene3D - 1 119 IPR038324 -
Pvu1g2387 154 SUPERFAMILY HRDC-like 4 119 IPR010997 GO:0000166|GO:0044237
Pvu1g2387 154 PANTHER CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN 1 137 IPR038846 GO:0005666|GO:0006384
Pvu1g2387 154 Pfam RNA polymerase Rpb4 10 117 IPR005574 GO:0006352|GO:0030880
Pvu1g2387 154 MobiDBLite consensus disorder prediction 117 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2387 Pvu-Chr1 49215260 49219041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2387 K25304 - gmx:100789488 232.261