Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2385 ATGGAAATAAGTATTGCAAGGCCTCATCTTGAAACACAGGGAATATTCTTTTCAAATATTTCAAGAACAATGGGATGGGAAAGCTCTAAGAAACTTTCATGTAAAGTGGCTGCCTTAAGTTCTACACGGGACTTTCACAGACTGGCCTCTTCTTTTCAAGCTTTTACTACAGTGTATCCTAAAAGGCATTTTATCTGTAGACCAAATTCTGTGCCGATTAGTTTACAGGAATCTGCATCATATGGAGATAATTCGCTCGAAGGTGAGAAGCCATCTAGAGACTCGGAAGAGGAGACTTTGGCACAACCACTTACCCGTGAACAGGTAATGACACTGCTTGCTGACACACAGAGAGAAAAACTCACTAAGAAGCTTAGTGAAGCCAACCAGCAAAATCGGTTCCTAAAAAGACAGTTGAACGTAAAGGAGGATGCATTGGTAAAATTCAAAAGTGAACTTGGTGTCATTGAGCTTGAAATTCAGGCTCTAACTAGACTAGCAGCAGAAATAGCTCAATGTGGTATTCCAGAAGGTTCAAGGAGGATCAATGGAAAGTACATTCATTCTCACCTTGTTGCTAGATTAGAAGCTTTACGTGGACAACTGAAGGAACAAATCAAGGACGTTGATGCGGCACAATCAAAGGCGGTTTCTGTGTTTTGGATTGGCATGGCTGAGAGCGTGCAAATTATGGGAACCTTTGATGGCTGGAGCCAAGGAGAGCACCTTTCACCGGAATATAATGGTAGTTACACAAGGTTTTCAACAACATTGTTGCTCCGGCCAGGAAGGTATGAAATCAAATTCTTGGTAGATGGTGAATGGAAGCTCTCCCCAGAATTCCCCATTATTGGTGGAGGGTTAACGAAAAATAATTTGTTAGTTGTTGAGTAA 894 0.415 MEISIARPHLETQGIFFSNISRTMGWESSKKLSCKVAALSSTRDFHRLASSFQAFTTVYPKRHFICRPNSVPISLQESASYGDNSLEGEKPSRDSEEETLAQPLTREQVMTLLADTQREKLTKKLSEANQQNRFLKRQLNVKEDALVKFKSELGVIELEIQALTRLAAEIAQCGIPEGSRRINGKYIHSHLVARLEALRGQLKEQIKDVDAAQSKAVSVFWIGMAESVQIMGTFDGWSQGEHLSPEYNGSYTRFSTTLLLRPGRYEIKFLVDGEWKLSPEFPIIGGGLTKNNLLVVE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2385 297 MobiDBLite consensus disorder prediction 81 101 - -
Pvu1g2385 297 SUPERFAMILY E set domains 217 296 IPR014756 -
Pvu1g2385 297 CDD E_set_AMPKbeta_like_N 217 296 - -
Pvu1g2385 297 MobiDBLite consensus disorder prediction 87 101 - -
Pvu1g2385 297 PANTHER PROTEIN PTST, CHLOROPLASTIC 3 297 - -
Pvu1g2385 297 Coils Coil 118 145 - -
Pvu1g2385 297 Coils Coil 192 215 - -
Pvu1g2385 297 Pfam Glycogen recognition site of AMP-activated protein kinase 219 286 IPR032640 -
Pvu1g2385 297 Gene3D Immunoglobulins 207 296 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2385 Pvu-Chr1 49201461 49207633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2385 - - vun:114189972 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2385 1 49201461 49207633 Pvu1g2385 1 49201461 49207633 ECH