Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2379 ATGTCGGCTTCATGCGGGGTGGTGGAGTGCGTATTCGTGTTGGGCTGCGCACGGTGGCTCTGGAAGCGCTGCACCTACGTTGGAAGCTACGACAGCGCCACGTGGCCGGCCGCCACCGCCGACGAGTTTGACCCGGTGCCGCGAGTCTGCCGCCTCATCCTCGCCAACTACGACCCCGATCTCCGAAACCCCCAGTACTACAAGCCTGCCCCCGGCCACCGCCTGAACCCGGACTGGGTCGTAAAGCGCGTGACCCATGAGGACACGCTCGGCTGTGCGCCGCCCTACCTCATCTACCTCGACCACGAGCACAAGGAGATCGTGCTGGCGGTGCGTGGCCTCAACCTGGCCAATGAGAGTGACTACAAAGTCCTCCTTGATAACCGGTTGGGGCAGCAGATGTTCGACGGCGGGTACGTGCACCGTGGGCTGCTGAAGTCGGCGGTGTGGCTGCTGAATAGGGAGTCGGAGACGCTGAAGCAGTTGTGGGTGGAGAACGGTTCCGAGTATGAGATGGTGTTCGCGGGTCACTCTTTGGGTTCTGGGGTGGTGTCGTTGTTGACGATTTTGGTTGTGAACCACAGGGACCGTTTGGGTGGGATTCCTAAGGAGAAGATTCGGTGTTATGCGCTTGCTCCTGCCAGGTGTATGTCCCTCAATTTGGCTGTCAAGTATGCCAATGTCATTCATTCTGTTGTTTTGCAGGATGATTTCTTGCCAAGAACGCCCACTCCATTGGAAGATATATTCAAATCTATATTCTGCTTGCCCTGCTTATTGTTCTTTGTCTGCCTGAGAGACACTTTCATACCTGAGGGTAGAAAGCTTAGAGATACAAGGAGACTTTATGCGCCTGGACGAATGTACCATATTGTGGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATTCCTGTTGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCAGATCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTGCAATTGATGAAGGAGCAGAGGTCTGAAACTGTGACAGTTCCTCCAACGGTACAAAAGTTTGAGAGGTTGAAGACCATAGAGAAAGAACATAGAGATGCTTTGGAAAGGGCTGTAAGCTTAAACGTGCCTCATGCAGTGGAGACTGCAGAGGAAGAAGCGTCGGAGAAGAATGAAGGTGAAGAAGCATCGGGTAATGGAGGTACCCAATCATTATCTAACTGGGATCAGGTTGTTGAAAAACTCCTAAAGAAGAGTAACACGGGAGAAGTAAACAATGTCTCGTCATCATAA 1317 0.5171 MSASCGVVECVFVLGCARWLWKRCTYVGSYDSATWPAATADEFDPVPRVCRLILANYDPDLRNPQYYKPAPGHRLNPDWVVKRVTHEDTLGCAPPYLIYLDHEHKEIVLAVRGLNLANESDYKVLLDNRLGQQMFDGGYVHRGLLKSAVWLLNRESETLKQLWVENGSEYEMVFAGHSLGSGVVSLLTILVVNHRDRLGGIPKEKIRCYALAPARCMSLNLAVKYANVIHSVVLQDDFLPRTPTPLEDIFKSIFCLPCLLFFVCLRDTFIPEGRKLRDTRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHGIIWIEREAEKALQLMKEQRSETVTVPPTVQKFERLKTIEKEHRDALERAVSLNVPHAVETAEEEASEKNEGEEASGNGGTQSLSNWDQVVEKLLKKSNTGEVNNVSSS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2379 438 CDD Lipase_3 42 244 - -
Pvu1g2379 438 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 432 - -
Pvu1g2379 438 Pfam Lipase 3 N-terminal region 8 67 IPR005592 GO:0016042
Pvu1g2379 438 Gene3D alpha/beta hydrolase 35 263 IPR029058 -
Pvu1g2379 438 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 432 - -
Pvu1g2379 438 Pfam Lipase (class 3) 108 244 IPR002921 GO:0006629
Pvu1g2379 438 SUPERFAMILY alpha/beta-Hydrolases 38 246 IPR029058 -
Pvu1g2379 438 MobiDBLite consensus disorder prediction 403 418 - -
Pvu1g2379 438 MobiDBLite consensus disorder prediction 384 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2379 Pvu-Chr1 49140860 49144997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2379 1 344 Miscellaneous Gene Families AT5G37710 75.000 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2379 - - gmx:100798831 766.148