Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2375 ATGGTGGCTGTGGTTCCTCAGGAAAATGTTGTAGCATTGGTTTCTCGTACCGGTAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCGTACAGATTTAAGATTGGGGAGAAAACTTCTTTGGACGTTTCTGATGAATTGGAAGTTCTGGTTATCAGTTCTCAGAAAGGAAAAGGGATGCTATTTCCAAAGGGAGGTTGGGAATTAGACGAATCAAAAAAGGAGGCAGCTTTGAGAGAAACCATAGAGGAAGCTGGGGTGAGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTACTTGTTCAAGAGCAATTGGAGTTCTGGCCTGAGCAAAACGTTCGTCAAAGAGTATGGATGAGCGTCACTGAAGCAAGGGATGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGATTAGTAAACCGTCTCGCGGGTCAAAAAGTTGGTCGAGATAATAAGCAAGTTCTTGGTTCTATGAACTGCACAAGAGATGCCAAATCTGACTTGTAA 582 0.4364 MVAVVPQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGEKTSLDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNVRQRVWMSVTEARDVCQHWWMKEALDRLVNRLAGQKVGRDNKQVLGSMNCTRDAKSDL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2375 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 173 - -
Pvu1g2375 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Pvu1g2375 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Pvu1g2375 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Pvu1g2375 193 CDD Nudix_Hydrolase_9 30 157 - -
Pvu1g2375 193 SUPERFAMILY Nudix 21 167 IPR015797 -
Pvu1g2375 193 Pfam NUDIX domain 54 161 IPR000086 -
Pvu1g2375 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2375 Pvu-Chr1 49091986 49093856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2375 K07766 - gmx:100795999 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2375 1 49091986 49093856 Pvu8g2453 8 55123369 55124889 PCT