LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g2374	ATGGCCGTTCAAGAGGAGAAAGTCATGGAGGAGAACGGCACAGAGGAAGCGAAGCGATTGATGCTGAAAATTGCGGCGATTCTCGATGAGGCTCGAACATCATACGCCACGCACAACCGAAAGCTCAAGGAACTGTCACTCCTCCGATCCAAATCCTCTTCTTCTTCTCTCTTCTTTTCCGCCTTCTCCAGAACCCTAACTCCTCTCTTCGACTTCCAGAGGCGCCTTGCCTCCGTTGAACGCGTCGTATCCTTCGTCTCTGCCCTCGCCGCTTCCGCCTCCGACGAGTTCCTCGATAACTTCCTCAAGTTCCTCCTAGCTGCCGCTACGGCATCCAACAAAACCGCCAGGTTCCGAGCCTGCCAGATCGTCTCCGAGATAATATTGCGGCTTCCAGATGATGCAGAAGTGAGCAATGAGCTATGGGATGAGGTGATAGAGTGGATGATGGTGAGGGTACGAGACAAGATCCCTGTGGTGCGTACTTTTGCGGTTAGAGCGCTTTCACGCTTTGTGAACGACTCTGTGAATAGTGACATCCTTGATTTGTTACTCGAGGTGCTCCTTTTGGAACAGAATGCAGATGTTCGGAAGATGATTGTGCTATCTTTGCCACCTTCTACTGCAACCGCTCAAGTTATCATTGATTGTACTTTGGATGTGAGTGAATCTGTACGCAAAGCAGCGTACTGTGTTCTAGCTAATAAGTTTCCTCTACAAAGCTTAAGCATTAAACTCAGGACAGTAATTCTTCGGAGAGGACTTGCTGATCGATCTCTTGCTGTCTCAAAGGAATGTTTTAAACTATTGAAAGATGAATGGCTTACGAAGTGTTGTAATGGTGATCCTGTAGAACTTTTGAAGTATCTTGATGTTGAAACCTATGAATCAGTTAGTGAGTCTGTCATGGAGGCACTTCTTAAAGGTGGTTTAGTAAAACTACAGAATGGTTCAAGTATCCAGCAGTACATATCGTCAAATGGTGACAGGACAGAAGGAGATACGGTTGATTGCCCGCTAAGCATTCAGCTGATGGAAGCTGAGGCTGCTCTTTACTGGAGGACTGTTTGCAAGCATTTACAGTCTGAAGCGCACGCAAAAGGTTCTGATGCTGCAGCAACAATGGGCACTGAAGCACAAGTATATGCGGCAGAAGCATCAGATAAAAATGACCTTTTAGAAAAAATTCTTCCCACAACAGTTAGTGAATATATTGAATTGGTCAGAGCTCATACAAATGCTGGATCAAACCATCGCTTTGCGAGTCGTCAGCTGCTTTTGCTTGGTGCAATGTTTGATTTTTCCGATGCTACGAATAGAAAGGATGCTGGTGCATTTCTGCATGAGCTTATATGCAAGTGTCCTGAGCATGAGGATGACGATGAAGGGAATATAGTTGTTCTTGGAGACGGATTAAGTTTTGGTGGAGACAATGATTGGGCTGAAGCTGTTGCCAGTTTGGCCAAGAAAGTTCATGCTGCTGCTGGTGAATTTGAAGAAGTTGTTCTTGAAATCATTAAAAAGCTCGCCCAACCTTGCAAGGAGAGAACAGCAAATCATGTGCAGTGGATGCACAGCCTTTCTCTAACTGGTCTTTTGCTAAAAAATGCAAAATCACTGCGAAAACTTCAGGGCAAGGCTATTACGCCTGATGAGCTACTCCAAACCTTACTACTTCCTGGGGTGAAACAATCTCACTTGGATGTGCAAAGGATTGCAGTCAGATGCCTTGGCCTTTTTGGACTTTTGGAAAGGAAACCAAGTGCAGAACTTTTGAAACAGTTGAGGATTTCATATATTAAGGGGCCACATTCAATCAGTACAGAGGCTTGTAAAGCATTAATTGATCTTGTAATGTGGCATGGTCCTGAAGAAGTTGACAAGGTGTTAAAGCTCAATATTCCATGCCAAATAAACAGTGAGAAGTCGACCTTTTGTCCTGTGAACTTTTCTGATTCAGAAGAGGATTTAGATGTTGAGACGCTTGATATCTTATATGGAGGCTTTGAAAATGCTGATTGGGCGAGTCCTTTGCCTAGCAACGAAGATGAGTGCGTGCATGCTATACTTGGAGAGGGATTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGTTTACCGATTTCTTTGCATCCTGTTCTTTTATCAAAACTCATTTACTTGTATTTCAGTGACGTGTCGGAACACTTGCACAGGTTGAAGCAATGCTTGTCTGTTTTCTTTGAGCTTTACCCATGTCTCTCAGCCAATCATAAGAGGTGCCTAGCGAAGAGTTTCATTCCAGTAATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTATGCTGGTTCTCCTTTTACGGTGTCTCAGATGCGAAAGCGTGCTGTTCAAGCTTCCCGTTTTATGCTTCAGATGGTGCAAATTCACTTGTACGTTAAAGAGACTCAACCTGACTGTGAAAGTACTGACACGGAACGGCCACAAGTCATAGATAAATGTGCAGAACTTCCATTTGAATGTGGTGAGGAGGGGCTTGCACTACGCATAGCCGTAGAGGTGGCGAGCTTTCAATCGAAGAAGACAGCTGCTGAGAAGGCTTACGTGTCGGCTTTATGTAGAACACTTGTTTTGCTTCATTTTCGGATATCAGAACAAGGGCCAATAAAATTTATGAGGAAGCTTATTTATCGCGTGGTTGAATGTGTATCTTCAGAGAAAGACCTGGTTAAAGAATTGAAACGTATGTCTGAGCGTCTTAGGACAGTTGATAGCCAACCAGATCAGGAATTGTTGCAAGATGATGTTAATCTTATTTTGGGGAAATTGGAACTTGACTGCGACCTGGATTTGGATGGCCCTGTTTCAATGCCTCAAACACCAGCTGCACCCCTGACTAGACCAACACGTTCCAGGAGAAGGGTAAGGATTGAGGAAGAAAGTTCTGACGAAGAATTACCTTCTGTGGTTCCTACCACCCATCATACTGTGAAAAGTCGCTCAGTGAGAGCAAGCAAAACCGCAGCAATTAACAAAATGTCTTCTGCTGGTAGATCGCTCAAAATTGACGAAATGGGTGAATTAGTGGAAGAAGACTCTGATGTGACATCTGACGATTCTTGTGCATCCGATTAG	3114	0.4422	MAVQEEKVMEENGTEEAKRLMLKIAAILDEARTSYATHNRKLKELSLLRSKSSSSSLFFSAFSRTLTPLFDFQRRLASVERVVSFVSALAASASDEFLDNFLKFLLAAATASNKTARFRACQIVSEIILRLPDDAEVSNELWDEVIEWMMVRVRDKIPVVRTFAVRALSRFVNDSVNSDILDLLLEVLLLEQNADVRKMIVLSLPPSTATAQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILRRGLADRSLAVSKECFKLLKDEWLTKCCNGDPVELLKYLDVETYESVSESVMEALLKGGLVKLQNGSSIQQYISSNGDRTEGDTVDCPLSIQLMEAEAALYWRTVCKHLQSEAHAKGSDAAATMGTEAQVYAAEASDKNDLLEKILPTTVSEYIELVRAHTNAGSNHRFASRQLLLLGAMFDFSDATNRKDAGAFLHELICKCPEHEDDDEGNIVVLGDGLSFGGDNDWAEAVASLAKKVHAAAGEFEEVVLEIIKKLAQPCKERTANHVQWMHSLSLTGLLLKNAKSLRKLQGKAITPDELLQTLLLPGVKQSHLDVQRIAVRCLGLFGLLERKPSAELLKQLRISYIKGPHSISTEACKALIDLVMWHGPEEVDKVLKLNIPCQINSEKSTFCPVNFSDSEEDLDVETLDILYGGFENADWASPLPSNEDECVHAILGEGFAKILLLSDNYPSLPISLHPVLLSKLIYLYFSDVSEHLHRLKQCLSVFFELYPCLSANHKRCLAKSFIPVMRSMWPGIFGNYAGSPFTVSQMRKRAVQASRFMLQMVQIHLYVKETQPDCESTDTERPQVIDKCAELPFECGEEGLALRIAVEVASFQSKKTAAEKAYVSALCRTLVLLHFRISEQGPIKFMRKLIYRVVECVSSEKDLVKELKRMSERLRTVDSQPDQELLQDDVNLILGKLELDCDLDLDGPVSMPQTPAAPLTRPTRSRRRVRIEEESSDEELPSVVPTTHHTVKSRSVRASKTAAINKMSSAGRSLKIDEMGELVEEDSDVTSDDSCASD*	1038

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g2374	1037	Pfam	Nuclear condensing complex subunits, C-term domain	526	874	IPR025977	-
	Pvu1g2374	1037	SUPERFAMILY	ARM repeat	80	746	IPR016024	-
	Pvu1g2374	1037	MobiDBLite	consensus disorder prediction	979	1007	-	-
	Pvu1g2374	1037	MobiDBLite	consensus disorder prediction	945	1037	-	-
	Pvu1g2374	1037	Gene3D	-	69	243	IPR011989	-
	Pvu1g2374	1037	PANTHER	CONDENSIN COMPLEX SUBUNIT 3-RELATED	14	1017	IPR027165	GO:0000796\|GO:0007076
	Pvu1g2374	1037	PANTHER	CONDENSIN COMPLEX SUBUNIT 3	14	1017	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g2374	K06678		-	gmx:100812144	1709.12

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g2374	1	49066615	49073111	Pvu1g2374	1	49066615	49073111	ECH