Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2367 ATGCATTCACTGGGGTACAGAACGAACGCGTTGCTCACCTTCGCCGTCACCGTTCTGGCTCTTATGTGCGGCATGGCCTCTCTCTCCGACAACCTTAATTTCCCCTCTCCCTCTGCCCAAGTCAAGGTCTTGAACATAAACTGGTTCAAGAAACAGCCCAACGCCAATGACCAGGTCAGCATGACATTGAATATATCAGCAGATTTGCAGTCCCTTTTTACATGGAACACAAAACAGGTTTTTGTTTTTCTTGCTGCTGAGTATGAAACACCTAAGAATTCCTTGAATCAGATATCTCTGTGGGATGCTATCATTCCCTCTAAAGAGCATGCCAAGTTTTGGATTCATACATCAAATAAGTACCGCTTCATTGACCAGGGAAGCAATTTGCGTGGCAAAGAATATAATCTGACTATGCATTGGCATGTTATGCCTAAGACTGGCAAAATGTTTGCAGATAAAATAGTTATGCCAGGTCACAGATTGCCAGAGGAATATAGATGA 504 0.4345 MHSLGYRTNALLTFAVTVLALMCGMASLSDNLNFPSPSAQVKVLNINWFKKQPNANDQVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPKNSLNQISLWDAIIPSKEHAKFWIHTSNKYRFIDQGSNLRGKEYNLTMHWHVMPKTGKMFADKIVMPGHRLPEEYR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2367 167 Pfam Signal peptidase subunit 1 164 IPR007653 GO:0005787|GO:0006465|GO:0016021
Pvu1g2367 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
Pvu1g2367 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
Pvu1g2367 167 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 3 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2367 Pvu-Chr1 48992618 48994603 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2367 K12948 - gmx:100306631 315.079