Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2365 ATGGCGCTGCTCGTTCTCTCTCTCTGCCTCCTCCTCTTCACCTTCCACCTTCCCTTCCGCTCATCTGGACAATCGAGCTCCATGGAATCAGTTCCCGATCTTCAGAACACTATGTATGCTTCCATCGAAGGATATCCTTGCGTGCGGCTTCTGAATCTCTCTGGAAACATCGGTTGTTCTAATCCTGGACGGGATAAGGTTGTGGCTCCTATTGTACGGTTCGAAAATGTTGACAAAATAGCTGAGCCGTCTGCTATACTGGTGTCACTTGAGGAGTTTCCAATTCTCTTTACTAGAATATCAGATGACTCTAGATTTGCTAGTAAAGTCAGCGGTGTACTTGTGGAACCAAGTACTGATTTGCAGAATAAGTTAAATGGATTTTCTCCCGATCAAAAGTTTCCACAAGGTCAATTTGCGCCTTACCATAATACCGGCTATGAATGGAATCCAATTGGTTCGGGTATTATGTGGAAATCCTACAGTTTTCCTGTGTTTTTACTCACTGAAAGTGGGTCAAAGACTCTTAAAGAGTTTGTAACAAAGAATGAGGACAAAAAGAAAGCTTATACTTCTAATGTGGCTGAGTTTGATCTGGTGATGCAGACGGTGAAATCTGGGACACTTGATTCAAAGTCTTGTTTAAAAGAAGAAACTTGCCTTCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCGATCAACACTTCTTCCTTACAACAGTCTAAGCCCATTTTATTGACAGTGGCCTCCATGGATTCTGCTTCATTTTTTCGGGACAAAAGCCTTGGGGCAGACTCCCCTATTTCTGGTTTAATTGCATTACTAGCGGCTGTTGATGCACTTTCTCATTTGGACGGTCTTGGTGACCTTAGTAAACAGCTTGTTTTCGCAGTTTTCACTGGAGAGGCATGGGGTTATCTTGGAAGTAGGAGATTTTTGGTAGAACTTGACTTGCACTCAGATGCTGTTCATGGTCTTAATCAGGGATTAATCGAATCGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTGAAGGTGTTAACAAATTTTTTGCTCATACAGAAGGGGATTCTTCTGCCACAAATCAGACATTGGCTGCCTTGAAACGTGCACAGGAATCACTGTTATCTGAAAACGTAAAGATAGCATCTGCAAGTTCTTCAAATCCTGGGATACCTCCATCATCTTTAATGTCCTTTTTGGAAAAGAATCCTGCAATCTCTGGTGTTGTTCTTGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTACCACAGTCACCTTGATGACTTATCAAATGTAAATTCGTCAGCTGTAGTTGCTGCTGCTTCTCTTGTTGCTCGAACCCTTTACATACTCGCTAGTGAAATTGAAGATGTTCAAGATCCAACTTTGGCTGCTATAAATGTCAATGTCTCACTTGTTGAACAACTTATGGGTTGCTTGTTGGACTGTGATCCTGGTCTCTCTTGTGAATTGGTGAAGAAATATATTTCACCCTTGTCAACCTGTCCAAGCCATTATGTTGGTGTTATCTTGGATGAACCTTCATCTACACCATATACAGGATATATCAATGATGTTCCCAGGTTCATTTGGAATTTTCTGGCTGACAGAACTTCTATCCCTAGGGAGACTAACAGCTCAGGTTGTCAACATGGTTGTAATGGTAAAGATGAAGTTTGCATCAAAGTAGAGACTGATGGAAAGGGAGTTTGTGCTCTCTCCACAACAAGGTATGTTCCAGCATACTCAACACGGCTAAAATTTGAATCAGGAGTGTGGAATGTTTTGTCTCCTAATTCCTCTGAAAAAATGGGGATTGTGGACCCTGTCTGGACTGAGAGCAACTGGAATTCAATAGGTATGCGGGTCTACACAGTCCAAAATGCTGCTTATGATCGGTTTGTTCTATTTGGGGGCATCACTTTGACAGTCTTCTCATACCTTGCAATAGCAACTGCAAGAACCTTTTTTTCCAAAGCAATGAAGAGGGATTGA 2010 0.4194 MALLVLSLCLLLFTFHLPFRSSGQSSSMESVPDLQNTMYASIEGYPCVRLLNLSGNIGCSNPGRDKVVAPIVRFENVDKIAEPSAILVSLEEFPILFTRISDDSRFASKVSGVLVEPSTDLQNKLNGFSPDQKFPQGQFAPYHNTGYEWNPIGSGIMWKSYSFPVFLLTESGSKTLKEFVTKNEDKKKAYTSNVAEFDLVMQTVKSGTLDSKSCLKEETCLPLGGYSVWSSLPPINTSSLQQSKPILLTVASMDSASFFRDKSLGADSPISGLIALLAAVDALSHLDGLGDLSKQLVFAVFTGEAWGYLGSRRFLVELDLHSDAVHGLNQGLIESVIEIGSVGKGLSEGVNKFFAHTEGDSSATNQTLAALKRAQESLLSENVKIASASSSNPGIPPSSLMSFLEKNPAISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSAVVAAASLVARTLYILASEIEDVQDPTLAAINVNVSLVEQLMGCLLDCDPGLSCELVKKYISPLSTCPSHYVGVILDEPSSTPYTGYINDVPRFIWNFLADRTSIPRETNSSGCQHGCNGKDEVCIKVETDGKGVCALSTTRYVPAYSTRLKFESGVWNVLSPNSSEKMGIVDPVWTESNWNSIGMRVYTVQNAAYDRFVLFGGITLTVFSYLAIATARTFFSKAMKRD* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2365 669 Pfam Nicastrin small lobe 46 203 IPR041084 -
Pvu1g2365 669 Pfam Nicastrin 245 454 - -
Pvu1g2365 669 Gene3D Zn peptidases 177 470 - -
Pvu1g2365 669 PANTHER NICASTRIN 19 668 IPR008710 GO:0016021|GO:0016485
Pvu1g2365 669 SUPERFAMILY Zn-dependent exopeptidases 218 456 - -
Pvu1g2365 669 CDD M28_Nicastrin 40 622 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2365 K06171 - gmx:100818367 1189.48