Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2354 ATGGAGAACGCAAGCACTAAATCTGCTTTGAAGGCTTCAAGAAGGTCTCCACCCAAAGAGGCTTCAAGAAGGTCTCCTCCACCCAAAGAAAGTACATTGGCTCCACCAAAGTCTCCACCAAGGTCTCCACCTAAAGAAAACACTAAGCCACAGGAATTCAAACTCCACACCCAAGAAAGAGCTGTCAAGCGTGCAATGTTCAATTATGCTGTGACAACAAAGTTCTATATCATGGAGCTGCAAAAGAAACAAGAGGAGAGGCTGCAAAAGTTGATTGAAGAGGAAGAGGTTCGTCTGCTAAGGAAGGATATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCCTTCTTCCCGCAAAGATCAAGCAGGAGTGTTCTAAGAGAATCATGCCTTCACATGATGAGCAGCAAGTGCTGGAGCTGCAGTGTTGGCAATGAAATTTACAACTTGCACCACTGTGGTCACCAAGCTCTGAAACCCATTAAGTAA 495 0.4465 MENASTKSALKASRRSPPKEASRRSPPPKESTLAPPKSPPRSPPKENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKQEERLQKLIEEEEVRLLRKDMVPRAQLMPYFDKPFFPQRSSRSVLRESCLHMMSSKCWSCSVGNEIYNLHHCGHQALKPIK* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2354 164 Coils Coil 78 98 - -
Pvu1g2354 164 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 157 - -
Pvu1g2354 164 MobiDBLite consensus disorder prediction 1 55 - -
Pvu1g2354 164 MobiDBLite consensus disorder prediction 29 46 - -
Pvu1g2354 164 Pfam Targeting protein for Xklp2 (TPX2) domain 53 125 IPR027329 -
Pvu1g2354 164 PANTHER TARGETING PROTEIN FOR XKLP2 1 157 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2354 Pvu-Chr1 48892242 48895535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2354 - - gmx:100305850 258.455