Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2353 ATGAAGCTCGACGTAGATGTGTTGAGATATCTCTCCAAAGATGATTTTAGGGTTCTCACCGCGGTTGAATTGGGCATGAGGAATCATGAAATCGTACCCACGGAACTCATCGATCGAATTGCGCGTCTCAAGCATGGAGGCACGTACAAGGTTTTGAAGAATTTGCTCAAGCACAAGTTGTTGCATCATGACTCTTCTAAATATGATGGATTCCGCCTTACCTATCTTGGTTATGATTTTCTTGCCATTAAAGCCATGGTGAACAAGGGAGTGTTTGTTGCTGTTGGTCGCCAAATTGGTGTTGGAAAGGAATCTGATATATTTGAGGTTGCTCGTGAAGATGGAACTGTTCTAGCCATGAAGTTGCATAGACTAGGTAGAACCTCTTTTAGAGCTGTCAAATCTAAGCGTGACTACTTGAGACATCGAAGTAGTTATAATTGGCTCTACTTGTCTCGCCTTGCTGCACTTAAAGAATTTGCTTTCATGAAGGCTCTGGAAAACCATGGCTTTCCTGTTCCAAATGCTGTGGAACACAATAGACATTGTGTAATCATGTCACTTGTTCAAGGTTATCCTCTTGTTCAGGTGAAGCAGTTAGAAAATCCAGAGGTAGTTTTTGAGACAATTATTGGTTTAGTTGTTCGGTTGGCTGAGCGTGGCCTTATTCATTGTGATTTCAATGAATTCAATATTATGATTGAAGATGATGAAAAAATTACCATGATTGATTTTCCACAAATGGTATCCGTTTCACATCGTAATGCACAGATGTACTTTGACCGTGATGTTGAATGCATCTTTAAGTTTTTCAGGAAAAGGTTCAATCTTTCTTTTGAAGAAAGCTTAGATGATATTGATGGTTCTGATGAGGGGAAAGATGAAGCTGGAAAACCCTGTTTTTCTGCGATAGAAAGAAGTGCTGGTTTTCTAGATAGGGAACTTGCTGCCAGTGGCTTTACTAGAAAGGAAGAGGAAGATATTCAAAGGTTCATTGAAGGCAGGGCAGAGAGTGATACAAATTCAGACAGTGAAGATGTTGACTTAGTAGAAGACGAGAATGAAGCAAGCACTATTGATGGTAATTCTTCAGACTTGTTGGAACAGAATGAGGGATGTGAAAATCAGGGGAAAGTGGAGAGTTGTGAAGCACGTGAAAGCAGTGGATCTGAAAAAGAAGATGCAAGTGACAATGAGGAAAACAGTGAAGAAGCAAAGGAAAATGAAGCTGAACTGGTTAAGAGCTTGAGTAAGCAAAGACGACGTGCTGTAGCAGCAGTTCGTAAGGGACGGAAGAGTGCTGGGGGAAGAAATTCCTACAAAGACAAAGGTGGTAGGTCATCTAACGATTCTAAAGTCCAGAAACAGTTGAGCATCTGGTGA 1383 0.4085 MKLDVDVLRYLSKDDFRVLTAVELGMRNHEIVPTELIDRIARLKHGGTYKVLKNLLKHKLLHHDSSKYDGFRLTYLGYDFLAIKAMVNKGVFVAVGRQIGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRSSYNWLYLSRLAALKEFAFMKALENHGFPVPNAVEHNRHCVIMSLVQGYPLVQVKQLENPEVVFETIIGLVVRLAERGLIHCDFNEFNIMIEDDEKITMIDFPQMVSVSHRNAQMYFDRDVECIFKFFRKRFNLSFEESLDDIDGSDEGKDEAGKPCFSAIERSAGFLDRELAASGFTRKEEEDIQRFIEGRAESDTNSDSEDVDLVEDENEASTIDGNSSDLLEQNEGCENQGKVESCEARESSGSEKEDASDNEENSEEAKENEAELVKSLSKQRRRAVAAVRKGRKSAGGRNSYKDKGGRSSNDSKVQKQLSIW* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2353 460 MobiDBLite consensus disorder prediction 356 376 - -
Pvu1g2353 460 CDD RIO2_C 94 274 IPR030484 GO:0004672
Pvu1g2353 460 MobiDBLite consensus disorder prediction 435 449 - -
Pvu1g2353 460 PANTHER BNAA01G19540D PROTEIN 1 460 - -
Pvu1g2353 460 SUPERFAMILY Protein kinase-like (PK-like) 95 271 IPR011009 -
Pvu1g2353 460 SUPERFAMILY "Winged helix" DNA-binding domain 5 90 IPR036390 -
Pvu1g2353 460 Pfam Rio2, N-terminal 8 89 IPR015285 GO:0004674|GO:0005524|GO:0006468
Pvu1g2353 460 MobiDBLite consensus disorder prediction 332 460 - -
Pvu1g2353 460 Gene3D Transferase(Phosphotransferase) domain 1 192 339 - -
Pvu1g2353 460 Gene3D - 1 90 IPR036388 -
Pvu1g2353 460 PANTHER SER/THR-PROTEIN KINASE RIO2 1 460 - -
Pvu1g2353 460 SMART rio_2 64 288 IPR000687 GO:0004674|GO:0005524
Pvu1g2353 460 Gene3D Phosphorylase Kinase; domain 1 93 190 - -
Pvu1g2353 460 MobiDBLite consensus disorder prediction 378 395 - -
Pvu1g2353 460 Pfam RIO1 family 106 279 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2353 K07179 - gmx:100789490 759.599