Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2346 ATGATACTTCTTCAACTTTTTCTACTAAGTATTGGTTTGGTAATCAATGCATCAACCCCAAATTCTTGTTCAAATTGTGGAGACTTTGTTGTTCCATATCCTCTGAGCACAAATGAGAATTGTGGAGATAAAAGGTACAAAATCTATTGCAATGATGAAGAGTTAGAGTTTCTTTCTGCAACAGGAACTTACTATAAGATCCTTAGAATTGATCCAAGTGCTAACAAACTTGTGATTAGACCACCCCTTATTTTAAAGAACACTTGTTATTCTTCTGATCTCTTAATGGGAGGTTTGTTGCTTGATGAAAGTTTGCCTTTCAATATATCTACACATAACACAGTCTTGTTATTTAATTGCACTAGTAATATCCTTCAGTCTCCACTCAATTGTACTTCAAATAGTATTTGCAGACAATTTGAGAAAAATGTTGAGGAAGGATCTGGTTGTATGAACACCCTTTGTTGTCATTACTTAAAGGATTCGGCCATGAATTCCCATAAGATCAGAGTCAGGATTGGGAGTTGCACATCTTACACTTGTTTAGTAGGTTTCACGCCTGATGACCCTCTTGAAACTTGGAATTATGGGATTGAGTTACAATGGTTGTCTCCTAATTGA 621 0.3559 MILLQLFLLSIGLVINASTPNSCSNCGDFVVPYPLSTNENCGDKRYKIYCNDEELEFLSATGTYYKILRIDPSANKLVIRPPLILKNTCYSSDLLMGGLLLDESLPFNISTHNTVLLFNCTSNILQSPLNCTSNSICRQFEKNVEEGSGCMNTLCCHYLKDSAMNSHKIRVRIGSCTSYTCLVGFTPDDPLETWNYGIELQWLSPN* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2346 206 Pfam Wall-associated receptor kinase galacturonan-binding 23 78 IPR025287 GO:0030247
Pvu1g2346 206 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 6 206 - -
Pvu1g2346 206 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 6 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2346 Pvu-Chr1 48838403 48839050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2346 18 206 Receptor kinase-like Gene Family AT5G02070 38.776 2.47e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2346 - - cam:101515529 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2346 1 48838403 48839050 Pvu1g2346 1 48838403 48839050 ECH