Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2338 ATGACATCAAAAAGAACCTATGCCGAGGAGGATCTTCAGAATAGTGATGACACCAATCTTCAAACTTTTGCTAAGAGGGGACGCCGTGAGGCCACTCTTACCGTTACTGCTCCTGAGCTTCGCAAATTGTTCGAGGAGTATATTCCACCTATTCTCCAGCGTCACTGGCCCCCGTGTTGCCGATGCTGCCATAACCATCAGGGTGGAAGTTCTGGAAGCAAAGATTTGCAATTGTGCTTCGTCAATGGATTGCCTCAAGTAATTTTCACCATGGGCTATCTCACAGCTGAGGGAGGTGGTTCACTTGAAATTGAGCTGCGTTATTCTGCATCGCAGCAACGCGTTGACAAAGAGGAGCTTTCGACCTTGAAGGCTCAGATCTATTTGCTGGATGGTGATTTTGAAAACGAGGACTGGACTGCTGAGGAATTTGATCGAAAAATTGTGAAACCAAGAGAGGGGAAGGGACCATTACTTAAAGGAAAAACGGATACTAAAATTGAAAAAGGTGTTGGTTTTATCAATAATAGGATGGTTACGGTTACTGATAATTCTGCCTCCACAAGAACCAGAACGTTTCGGTTGGGAGTTAGAATCGTAGGATCTAATTCCTCTGGAGCAAGAATCAGAGAAGCTATAAGCGAACCCTTCAGGGTCAAGGATAAACGTGGAAAGTCGACCATTAAACACGAGGTTCCATCCTTGAACGATGATGTATGGCGTCTGAAGCACATTGGAAGAACGGGTGAGCTTCGCAAGCAGCTTTCCCAGAAAGGAATAAAAACTGTGAAGGATCTCTTGCGGTTGAACACAATGGGTTCATTACGGGAGAAATTCGGCAAGACTAATAATACATGGGACAAAATCATTGAACATGCTAAAGATTGTGAACTAGATGATTATGAGCGCTACTCGTATCGGTGTCGTGCTGGGGAACAAGATACATCTGTTTCCCTTGTCTTTAACTGCATCTATGAGCTCGAGGAGGTAATTTTTAATGAGCAACATCGTTCTCTGCAATCTCTGAACAGGGAGGAGAAGAGGTTCGTGGAAAATATTAAACTGGAAGCATACTCAAATCCACAGAAGATGGAGCTAATTGAGACACCAACACGTGACATAGTGACTATGTTAACAGATACACAGGTGACATCATCGAGTGCTCCATATCAAGGTCTGCAACTGCCAGGCCAATCAGAAACATGGACAGGTATCTTTCCATCATTTGTAGATGATCCCTTGTGGATACTTGCCGACCAATGGGAGCAACCAAACCTTTTATCCTTTGGAGGTGGTGACGATGGAGCATCATATAGCCAATACAACCATTCCTTTTTGCTCAACACTGCTGGGTACATGTCAACCAAGACTGTTTGGAAGAAAGTCAGAAATGCTTTCAAATGTGTCTTCAGATTGCATATGGCTAAAATGCGCTCAGAATTGAATTGA 1449 0.4375 MTSKRTYAEEDLQNSDDTNLQTFAKRGRREATLTVTAPELRKLFEEYIPPILQRHWPPCCRCCHNHQGGSSGSKDLQLCFVNGLPQVIFTMGYLTAEGGGSLEIELRYSASQQRVDKEELSTLKAQIYLLDGDFENEDWTAEEFDRKIVKPREGKGPLLKGKTDTKIEKGVGFINNRMVTVTDNSASTRTRTFRLGVRIVGSNSSGARIREAISEPFRVKDKRGKSTIKHEVPSLNDDVWRLKHIGRTGELRKQLSQKGIKTVKDLLRLNTMGSLREKFGKTNNTWDKIIEHAKDCELDDYERYSYRCRAGEQDTSVSLVFNCIYELEEVIFNEQHRSLQSLNREEKRFVENIKLEAYSNPQKMELIETPTRDIVTMLTDTQVTSSSAPYQGLQLPGQSETWTGIFPSFVDDPLWILADQWEQPNLLSFGGGDDGASYSQYNHSFLLNTAGYMSTKTVWKKVRNAFKCVFRLHMAKMRSELN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2338 482 Pfam Calmodulin binding protein C-terminal domain 304 365 IPR046829 -
Pvu1g2338 482 Pfam Calmodulin binding protein central domain 234 296 IPR046830 -
Pvu1g2338 482 PANTHER OS02G0177800 PROTEIN 29 469 IPR012416 GO:0005516
Pvu1g2338 482 Pfam Calmodulin binding protein-like N-terminal domain 76 222 IPR046831 -
Pvu1g2338 482 PANTHER CALMODULIN-BINDING PROTEIN 60 G 29 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2338 Pvu-Chr1 48777831 48780784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2338 38 360 Calmodulin-binding Proteins AT5G57580 38.529 8.52e-57 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2338 - - vra:106757360 559.681