Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2333 ATGTGGAGCTCCACAACGAGGATGGTGGTGGCCGCTGCAGCCATAACGCTCATGATCTTTCTCTCATCGGCTTCAGCCGACGACGTCGTTGCGCTAACCGAGGACACCTTCGAAAAAGAGGTTGGCCAGGATCGTGGCGCTCTCGTCGAGTTTTACGCCCCCTGGTGTGGACATTGTAAAAGGCTTGCGCCGGAGTACGAACAACTTGGAACGACTTTCAGAAAAGCGAAGTCGGTTTTGATTGCGAAGGTGGATTGTGATGAGCATAAAAGCGTTTGCACTAAATATGGGGTTTCTGGTTACCCTACCATTAAATGGTTTCCCAAGGGATCTCTAGAACCAAGAAAGTACGAAGGTGCACGTTCTGCAGAAGCGCTTGCTGCGTTTGTGAACGTTGAAGCAGGTACTAGTGTGAAGATAGCTTCTGCTCCATCCAGCGTGGTAATTCTCTCTCCAGAAAACTTTGATGAGGTTGTCTTGGATGAAACAAAAGATGTTCTGGTGGAATTCTATGCACCATGGTGTGGTCACTGCAAGGCCCTTGCCCCTACTTATGAAAAGGTTGCCGCAGCATTTAACCTTGATGAAGAAGTAGTTATAGCCAACGTTGATGCTGACAAGTATAAGAATTTGGCTGAGAAATATGGTGTTAGTGGCTATCCTACACTGAAATTTTTCCCAAAGAGCAATAAAGCTGGTGAAGATTATAATGGTGGTCGTGATTTGGATGATTTTGTAGCCTTCATCAATGAGAAATGTGGTACATTCCGTGATGGGAAGGGACAGCTCAGTTCTAAAGCTGGTATAGTAGAATCTCTGGATGACTTGGTGAAGGAGTTTGTGGATGCTGAAGATAATGATAAGAAGGCAGTATATTCCCAACTCGAGGAGGAAGTTAAGAAGCTTAAGGGTTCTTCTGCCAGATATGGCAACCTCTACTTAAAACTTGCTAAGAAGAGTATGGAAAAGGGTTCGGACTATGCAAAGAATGAAATTCTTCGTCTTGACCGCATGCTTGAGAAGAAGTCAATCAGCCCAGCAAAAGCAGATGAATTCACTCTGAAGAAGAACATCTTATTCACATTTGCTTGA 1092 0.4487 MWSSTTRMVVAAAAITLMIFLSSASADDVVALTEDTFEKEVGQDRGALVEFYAPWCGHCKRLAPEYEQLGTTFRKAKSVLIAKVDCDEHKSVCTKYGVSGYPTIKWFPKGSLEPRKYEGARSAEALAAFVNVEAGTSVKIASAPSSVVILSPENFDEVVLDETKDVLVEFYAPWCGHCKALAPTYEKVAAAFNLDEEVVIANVDADKYKNLAEKYGVSGYPTLKFFPKSNKAGEDYNGGRDLDDFVAFINEKCGTFRDGKGQLSSKAGIVESLDDLVKEFVDAEDNDKKAVYSQLEEEVKKLKGSSARYGNLYLKLAKKSMEKGSDYAKNEILRLDRMLEKKSISPAKADEFTLKKNILFTFA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2333 363 CDD PDI_a_ERp38 28 130 - -
Pvu1g2333 363 TIGRFAM pdi_dom: protein disulfide-isomerase domain 151 252 IPR005788 GO:0003756
Pvu1g2333 363 TIGRFAM pdi_dom: protein disulfide-isomerase domain 32 132 IPR005788 GO:0003756
Pvu1g2333 363 Pfam Thioredoxin 29 131 IPR013766 -
Pvu1g2333 363 Pfam Thioredoxin 147 250 IPR013766 -
Pvu1g2333 363 CDD PDI_a_ERp38 146 249 - -
Pvu1g2333 363 Gene3D Glutaredoxin 140 263 - -
Pvu1g2333 363 Gene3D Glutaredoxin 22 139 - -
Pvu1g2333 363 Gene3D - 268 363 IPR036356 -
Pvu1g2333 363 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 14 362 - -
Pvu1g2333 363 PANTHER PROTEIN DISULFIDE ISOMERASE-LIKE 2-1 14 362 - -
Pvu1g2333 363 ProSiteProfiles Thioredoxin domain profile. 6 110 IPR013766 -
Pvu1g2333 363 ProSiteProfiles Thioredoxin domain profile. 117 254 IPR013766 -
Pvu1g2333 363 PRINTS Thioredoxin family signature 166 174 - -
Pvu1g2333 363 PRINTS Thioredoxin family signature 174 183 - -
Pvu1g2333 363 PRINTS Thioredoxin family signature 216 227 - -
Pvu1g2333 363 CDD ERp29c 270 362 IPR011679 GO:0005783
Pvu1g2333 363 SUPERFAMILY ERP29 C domain-like 267 362 IPR036356 -
Pvu1g2333 363 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 268 362 IPR011679 GO:0005783
Pvu1g2333 363 SUPERFAMILY Thioredoxin-like 27 131 IPR036249 -
Pvu1g2333 363 ProSitePatterns Thioredoxin family active site. 167 185 IPR017937 -
Pvu1g2333 363 SUPERFAMILY Thioredoxin-like 144 255 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2333 Pvu-Chr1 48722966 48726915 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2333 K09584 - gmx:100796355 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2333 1 48722966 48726915 Pvu1g2333 1 48722966 48726915 ECH