Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2330 ATGAGTGAAGAATCTAGAAACGAACGTAGGGTCCTGGTGGCCGTGGACGAAAGCGATGAGAGCATGTACGCTCTTTCTTGGAGTCTCAAGAACATCATTTTCCAGAATTCCACTGATAACCTTGTCCTTCTATACGTCAAGCCCCATCATGGAACTTATGCAAGTGCCGCAGACAGATTGGATGATCCTGAAGCTCCAGTGTTTTCTGCTGAGGTAAGGGCAGCCATCCGCAAGTATAGTCAAGATGTAGCCGATTGCGTGATAGAGAAATCCAAGAGATTGTGTAAAAATCTCCAAAACGTAAAGGTGGAGACACACATAGGGAGTGGAGACCCGAGGGAAGTGATCTGTGAGATGACTGAGAAGTTGAATGCTGATTTGCTAGTCATGGGTAGCCACGGCCATGGACTTATAAAGAGTATTTTTCTTGGAAGTGTAAGCAATCACTGCTCCCAGAAGGTGAAGTGCCCAGTTCTGATTGTGAAGAAGCCAAAACCATGTGCAGGTGCTGAGAAGTGA 519 0.4624 MSEESRNERRVLVAVDESDESMYALSWSLKNIIFQNSTDNLVLLYVKPHHGTYASAADRLDDPEAPVFSAEVRAAIRKYSQDVADCVIEKSKRLCKNLQNVKVETHIGSGDPREVICEMTEKLNADLLVMGSHGHGLIKSIFLGSVSNHCSQKVKCPVLIVKKPKPCAGAEK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2330 172 CDD USP_Like 10 161 - -
Pvu1g2330 172 Pfam Universal stress protein family 9 162 IPR006016 -
Pvu1g2330 172 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 166 - -
Pvu1g2330 172 PANTHER OS05G0357525 PROTEIN 4 166 - -
Pvu1g2330 172 PRINTS Universal stress protein signature 8 26 IPR006015 -
Pvu1g2330 172 PRINTS Universal stress protein signature 122 134 IPR006015 -
Pvu1g2330 172 PRINTS Universal stress protein signature 140 162 IPR006015 -
Pvu1g2330 172 Gene3D HUPs 3 171 IPR014729 -
Pvu1g2330 172 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2330 Pvu-Chr1 48707899 48709122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2330 - - gmx:100804158 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2330 1 48707899 48709122 Pvu7g2209 7 45385268 45386541 ECH
Pvu1g2330 1 48707899 48709122 Pvu1g2330 1 48707899 48709122 ECH
Pvu1g2330 1 48707899 48709122 Pvu7g2065 7 44009523 44010548 PCT