Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2324 ATGGCAACGACATTTGAAACGGGTCGTTTTAACCTATTGCGCCCAACGGCCTCAAAGCAGTTGTTATTCTCCTCCAGTATCAAACGACCAAAACCCGTTTCGCTTCATTCTTCTCGATTCTTCCATTGCCGATCGAAACGCCTCGTTTTGACGCAGAGATTCGCAGTGAAAGCTTGCGTGGTGAATGTCGAGCAGAAGAACGTCGCCGCGGAATCAGGAGAGTGGGGGAAGGTTTCCGCGGTGCTCTTCGACATGGACGGCGTGCTTTGCAACAGCGAAGAGCCTTCAAGAAAAGCCGGCGTCGATTTGTTCGCCGAGATGGGCATCGAAGTCACCGTCGACGATTTTGTGCCGTTTACGGGAACCGGAGAAGCTAACTTTTTGGGAGGTGTTGCTTCTGTTAAGGGAGTTAAAGGATTTGACACAGAAGCTGCCAAAAAAAGGTTCTTTGAAATATATTTAAATAAGTTTGCAAAACCAGATTCTGGAATAGGATTTCCAGGTGCCCTTGAACTTATTTCTCAGTGTAAAAGTAAAGGGCTTAAAGTGGCTGTTGCATCTAGTGCTGATCGTGTAAAGGTTGATGCAAATCTAGCCGCTGCTGGTTTACCATTGTCAATGTTCGATGTGATTGTCTCTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTCTTAGCTGCATCAAGAATATTGAATGTGCCCCCTAGTGAGTGTATTGTTATAGAAGATGCGCTAGCTGGAGTGCAAGCTGCCAAAGCTGCGCAAATGCGCTGCATAGCTGTAAGGACCTCATTATCAGATGAGGTTTTGGAATCTGCCGAACCAACATTTATCCGGGATGACATAGGAAGTGTTTCACTTGAGGATATTCTTTATGGTGGCTCTGTTGGATATAATGAGAGGATGCAGGGCTCTGAAACTCTAAATAATTTTGCAGAGTCTTCATCTGCTGTGCTTGCTGGAGGGTTGCAGGGTTCTCGGCGAGATATACTGAGATTTGGAAGTCTGGGCATTGCTATCTCTTGCCTTATCTTCACCTTAAGTAACTGGAAGGCAATGCAATATGCTTCCCCGAAGGCAGTTTGGAATCAGTTGTTTGGTGTTATCCAGCCACCCTTGGAGCAGAAAGATAGCTCAAGATATGATAGAATCCAGCAATTTGTGAACTACATATCTGATCTGGAAAGCAG 1199 0.4537 MATTFETGRFNLLRPTASKQLLFSSSIKRPKPVSLHSSRFFHCRSKRLVLTQRFAVKACVVNVEQKNVAAESGEWGKVSAVLFDMDGVLCNSEEPSRKAGVDLFAEMGIEVTVDDFVPFTGTGEANFLGGVASVKGVKGFDTEAAKKRFFEIYLNKFAKPDSGIGFPGALELISQCKSKGLKVAVASSADRVKVDANLAAAGLPLSMFDVIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDALAGVQAAKAAQMRCIAVRTSLSDEVLESAEPTFIRDDIGSVSLEDILYGGSVGYNERMQGSETLNNFAESSSAVLAGGLQGSRRDILRFGSLGIAISCLIFTLSNWKAMQYASPKAVWNQLFGVIQPPLEQKDSSRYDRIQQFVNYISDLES 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2324 399 Pfam Haloacid dehalogenase-like hydrolase 81 264 IPR041492 -
Pvu1g2324 399 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 77 287 - -
Pvu1g2324 399 SUPERFAMILY HAD-like 78 287 IPR036412 -
Pvu1g2324 399 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 167 264 IPR006439 -
Pvu1g2324 399 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 39 299 - -
Pvu1g2324 399 SFLD Haloacid Dehalogenase 77 287 - -
Pvu1g2324 399 CDD HAD_BPGM-like 80 266 - -
Pvu1g2324 399 PANTHER PROTEIN CBBY-LIKE 39 299 - -
Pvu1g2324 399 Gene3D Putative phosphatase; domain 2 91 162 IPR023198 -
Pvu1g2324 399 Gene3D - 80 271 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2324 Pvu-Chr1 48641086 48646751 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2324 - - gmx:100795843 668.692