Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2323 GGAAGTGCTCAGATAGTTCCAGAATTTCCATCTAAACTTGATTGGCTGAATACAGCTCCACTTCAGTTTCGCAGGGATCTGAAAGGAAAAATTGTATTGCTGGATTTCTGGACTTATTGTTGTATAAACTGTATGCACGTGTTGCCAGACTTAGATGCTTTAGAGAAAAAATACAAAGATACGCCGTTTGTTGTTGTGGGTGTTCATTCTGCAAAGTTTGATAACGAGAAAGATTCTGAAGCAATTCGCAATGCAGTTCTACGCTATGGAATTTCTCACCCAGTTGTCAACGACGGAGACATGTTTCTTTGGAGGAACTTGGGTATAAATTCGTGGCCAACATTTGCTATAGTTGGCCCTGATGGTAAGCTTCTTGCACAACTAGCAGGAGAAGGTCACAAGAAGGATCTAGATGATTTTGTGGAGGCTGCACTTCTATTTTATGGAAAGCAAAACATCCTGGACAATACGCCAATTTCCCTGAGTTTGGAGAAAGATAATGATCCACGCCTGTTGACTTCTCCATTGAAGTTTCCTGGAAAGCTAGCAGTTGATGTCCTTAATAACAGGCTTTTTATTTCTGACAGCAACCATAATCGCATAGTGGTTACTGACCTTGATGGGAATTTTATTGTACAAATTGGGAGCAGCGGGGAGGAAGGTTTGAAGGATGGTTCCTTTGATGATGCTACTTTTAACCGTCCTCAGGGCCTTGCTTATAATGCAAAGAAAAACATCCTTTATGTTGCAGACACTGAAAACCATGCTTTGAGGGAAATTGATTTTGTTAATGAGAAAGTGCGGACCCTTGCTGGAAATGGGACCAAGGGCTCTGATTATGTTGGTGGTGGAAAAGGAGACACACAGCTTCTCAATTCCCCTTGGGATGTCTGCTTTCATCCACTTGAAGAAAAAATTTATATCGCCATGGCTGGCCAGCATCAGATTTGGGAGCACAATTTATTGGCGGAAACTTCGAGAGCATTTAGTGGTGATGGCTATGAAAGAAATTTAAATGGATCAAGTTCTACAAACACGTCATTTGCACAACCTTCTGGTCTTTCATTGTCTCAAGATCTAAGCAAGATCTACATTGCTGATAGTGAGAGTAGTTCAATTAGAGCTGTGGATCTTAAAACAGGAGGATCTCAGTTGTTAGCTGGTGGTGACCCAATGTTCTCTGACAATTTGTTTAAGTTTGGTGATCAAGATGGAATAGGGTCTGATGTACTTCTTCAACATCCATTGGGGGTTTTGTGTGGAAATGATGGTGAAATTTATATCGCAGATAGCTACAATCACAAGATCAAGAAGCTAGATCCAACTAGTAAAAGAGTTAACACCATTGCAGGAACTGGAAAAGCTGGTTTCAAAGATGGAACGGCTGTAAAAGCTCAGCTCTCTGAACCGGCAGGAATTGTTGAAGGTAACAATGGGAGATTATTTATATCTGACACAAACAACAGCTTAATTCGATATCTAGATTTAAACGCTGATGAAACTGAACTCCGTACCTTGGAGCTTAAAGGAATTCAGCCTCCTAAACCAAAATCAAGATCTTTTAAACGTCTTAGACGGCGAGCATCAGCCGATACATTGCCAATTACGATTGATGCCATTTCATCAAATGAGGGAAACTTGTCTATTAAAATATCATTACCAAGCGAGTATCATTTCTCAAAGGAAGCACGCAGTAAATTCAGCGTGGATATTGAACCTGAAGATGCTGTGAATATTGAACCCCTTGATGGATTCATTAGTCCAGAAGGATCTGCAACTCTTCACTTTAAGAGATCCTCTAACTCTGCTTCAATGGGAAGAATTAATTGTAAGGTATACTATTGCAAGGAAGATGAAGTTTGTTTGTACCAGTCTTTGCTGTTTGAGGTCCCCTTCCCAGAGGGAGTTTCTAGCCCTGCCAAAGCAGACGTCACTCTTGCACATCTTGTGAAACCCAAAACTTCAACCAACAGCTTACTGCAGACAGTTGCTCCGTGA 1998 0.4099 GSAQIVPEFPSKLDWLNTAPLQFRRDLKGKIVLLDFWTYCCINCMHVLPDLDALEKKYKDTPFVVVGVHSAKFDNEKDSEAIRNAVLRYGISHPVVNDGDMFLWRNLGINSWPTFAIVGPDGKLLAQLAGEGHKKDLDDFVEAALLFYGKQNILDNTPISLSLEKDNDPRLLTSPLKFPGKLAVDVLNNRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLKDGSFDDATFNRPQGLAYNAKKNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYVGGGKGDTQLLNSPWDVCFHPLEEKIYIAMAGQHQIWEHNLLAETSRAFSGDGYERNLNGSSSTNTSFAQPSGLSLSQDLSKIYIADSESSSIRAVDLKTGGSQLLAGGDPMFSDNLFKFGDQDGIGSDVLLQHPLGVLCGNDGEIYIADSYNHKIKKLDPTSKRVNTIAGTGKAGFKDGTAVKAQLSEPAGIVEGNNGRLFISDTNNSLIRYLDLNADETELRTLELKGIQPPKPKSRSFKRLRRRASADTLPITIDAISSNEGNLSIKISLPSEYHFSKEARSKFSVDIEPEDAVNIEPLDGFISPEGSATLHFKRSSNSASMGRINCKVYYCKEDEVCLYQSLLFEVPFPEGVSSPAKADVTLAHLVKPKTSTNSLLQTVAP* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2323 665 Pfam NHL repeat 232 257 IPR001258 GO:0005515
Pvu1g2323 665 CDD NHL-2_like 214 555 IPR045302 -
Pvu1g2323 665 SUPERFAMILY NHL repeat 170 497 - -
Pvu1g2323 665 Pfam Thioredoxin-like 29 123 IPR012336 -
Pvu1g2323 665 SUPERFAMILY Thioredoxin-like 4 142 IPR036249 -
Pvu1g2323 665 SMART LY_2 169 211 IPR000033 -
Pvu1g2323 665 Gene3D - 154 318 IPR011042 -
Pvu1g2323 665 Gene3D - 395 494 IPR011042 -
Pvu1g2323 665 ProSiteProfiles NHL repeat profile. 412 442 IPR001258 GO:0005515
Pvu1g2323 665 Gene3D Glutaredoxin 2 147 - -
Pvu1g2323 665 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 4 664 - -
Pvu1g2323 665 ProSiteProfiles Thioredoxin domain profile. 1 146 IPR013766 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2323 - - gmx:100795843 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2323 1 48629550 48640826 Pvu1g2323 1 48629550 48640826 ECH