Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2318 ATGATCACGACCAACCTTGTTTGCAACTGCACCATGAAACCATCCCCTAAGATCCTAATTGGTTACAAGAATTCATGGTTTGCAAGATGCCACCATACTCTAACCATGTCTACGTCCAATAAATCCACCACTTGTGGCCTCAATCTTCATCTCATCACCATGCAGAGCCCTTTTCACGCGCGGGAATTTGGACGCATAATGCATGGTAGCCAACAAGTTTTCGGGCTACCCTCTTCGAGTTTTGGCCAATCAAGTTTCATCGGTTTAAGCACAACAAGAATCTCAAAACGGGGTGTGTCTTCCATTGCCGGAATAGACTTAAAATTCAAGTCTCGTGACTTCTCAAACTCCGTGGAGACATATGAGAACGGTAATGGTAAAATGGTTTGCCTAAAGGGTGGCATGAATGTGAAGCCAAATGTGGGGGAAAGGGTTGACAATGACGAGGATAGTGTTGAAGGAGAGGAAGTGTCTGGTTTAGAAGTTGGCGAGAAAAATGAGAAGAGTGAGGATGTAGAAGAGGGTGAGAAGGCAGAGGAAGAGGAGACTGAGGTGGAGAAAGAGGCATGGCAGTTATTGCAAGAGGCACTTGTGACCTACTGTGACCACCCTGTGGGGACGGTGGCAGCGAATGATTCGGATGATCAACAACCTTTGAATTATGATCAGGTTTTTATAAGGGATTTTATCCCTTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAAAGGAGATTGTCAAGAACTTTCTCCTTAACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTGGACTGCTATAGCCCAGGGCAGGGCCTGATGCCTGCTAGTTTCAAAGTTAAAACTAAGAAACTCGATGAAGGAAAAACTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATAGGCCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTGCGGGCTTATGGGAAGATTACTGGGGAATACGGCTTGCAAGAAAGGTTGGATGTTCAAACGGGCCTAAGAATGATCCTTCATCTGTGCTTAACGGATGGCTTTGACATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGGAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAGGCCTTGTTTTACTCAGCTCTTCGCTCTGCCCGTGAGATGCTAGCTGCAGATGAAAATTCCAAGAATATGATCGGAGAAATTAACAATAGACTCAGTGCACTACAATTTCACATCAGAGAATACTATTGGTTGGACATGCAAAAGATGAATGAGATATACAGGTACAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTTTGTGGCTAATTGATTGGGTTCCAGAGGAAGGAGGATATCTGCTAGGGAATCTGCAGCCAGCTCATATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATCGTTTCCGCTTTGGGCACCCCAAAACAGAATAATGCTATTTTGAATCTGATAGAAGCAAATTGGGGTGATCTCGTGGGGGAAATGCCTCTTAAGATATGTTATCCTGCCTTGGAGCATCATGAATGGCGAATAATTACAGGCTGTGACCCCAAGAATACCCCTTGGTCATATCATAACGGTGGGTCCTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGAATAGAACTGAACTAGCGGAGAAAGCAGTTGCTTTGGCTGAGAAAAGGCTGCCACGTGATTCTTGGCCAGAATATTATGACACACGCTCAGCAAGATTTATTGGCAAACAAGCCCGGCTTTATCAAACTTGGACTTTAGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATCCTAAATTGGCCTCCTTGTTAAGCTGGGATGAGGATTTTGAGATCCTTGAGACTTGTGTTTGTTTGCTTAACAAGAGTGGCAGAGCCAAATGCTCTCGTGACGCTGCCAAATCTCAGATTCTCGTGTGA 2010 0.4463 MITTNLVCNCTMKPSPKILIGYKNSWFARCHHTLTMSTSNKSTTCGLNLHLITMQSPFHAREFGRIMHGSQQVFGLPSSSFGQSSFIGLSTTRISKRGVSSIAGIDLKFKSRDFSNSVETYENGNGKMVCLKGGMNVKPNVGERVDNDEDSVEGEEVSGLEVGEKNEKSEDVEEGEKAEEEETEVEKEAWQLLQEALVTYCDHPVGTVAANDSDDQQPLNYDQVFIRDFIPSALAFLLKGEKEIVKNFLLNTLQLQSWEKTVDCYSPGQGLMPASFKVKTKKLDEGKTEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGEYGLQERLDVQTGLRMILHLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMLAADENSKNMIGEINNRLSALQFHIREYYWLDMQKMNEIYRYKTEEYSLDATNKFNIYPDQIPLWLIDWVPEEGGYLLGNLQPAHMDFRFFMLGNLWSIVSALGTPKQNNAILNLIEANWGDLVGEMPLKICYPALEHHEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACMKMNRTELAEKAVALAEKRLPRDSWPEYYDTRSARFIGKQARLYQTWTLAGFLASKMLLKNPKLASLLSWDEDFEILETCVCLLNKSGRAKCSRDAAKSQILV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2318 669 PANTHER ALKALINE/NEUTRAL INVERTASE 5 669 - -
Pvu1g2318 669 SUPERFAMILY Six-hairpin glycosidases 189 620 IPR008928 GO:0005975
Pvu1g2318 669 MobiDBLite consensus disorder prediction 140 183 - -
Pvu1g2318 669 Pfam Alkaline and neutral invertase 189 628 IPR024746 GO:0033926
Pvu1g2318 669 Gene3D - 215 616 IPR012341 GO:0005975
Pvu1g2318 669 MobiDBLite consensus disorder prediction 158 172 - -
Pvu1g2318 669 PANTHER - 5 669 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2318 Pvu-Chr1 48597665 48600581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2318 - - gmx:100812691 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2318 1 48597665 48600581 Pvu7g2090 7 44239948 44243906 ECH
Pvu1g2318 1 48597665 48600581 Pvu1g2318 1 48597665 48600581 ECH
Pvu1g2318 1 48597665 48600581 Pvu7g2090 7 44239948 44243906 PCT