Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2313 ATGGCAAGACTGGTGGCACTCCAACAGAACCAACTATCTTTCTCTCCCTTGGCCTCCTCTCTTTCTGACTTCAGTGGAACCAGACTTCCTACTCAACTTCAGTTGAAGAGAAAATTATGGCAGCCAAAAGGGTCTTTCTATGTCTCCGCATCAAGCACCAAGAAAATCCTCATCATGGGAGGCACCAGGTTTATTGGAGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGTAAAACGCCTGTAACTCAACAATTGCCAGGTGAATCAGACAGTGATTATGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTTTGAATTTGTAAAATCCAGTCTCTCAGCAGAGGGGTTTGAAGTTGTATATGACATAAATGGACGAGAGGCAGATGAAGTTGAGCCCATACTGGATGCTCTGCCTAATCTGGAACAGTTTATTTACTGTTCTTCCGCTGGTGTCTATCTCAAATCTGACCTATTACCTCATGCAGAGACTGATGCAGTTGATCCTAAGAGTAGGCACAAGGGAAAGCTTGAGACAGAAAGTTTGCTACAATCAAAGGATGTTAATTGGACTTCTATAAGGCCAGTTTACATATATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCATAGATTGAAAGCTGGTCGCCCAATTCCCATCCCTAGCTCAGGGATACAAATAACTCAACTTGGTCATGTTAAGGATTTGGCAAGAGCTTTCGTTCAGGTTCTTGGTAATGACAAGGCCAGCAAGGAAGTATTCAACATCTCGGGAGAGAAATATGTGACATTTGATGGATTAGCAAAAGCATGTGCGAAGGCTGGTGGATTCCCAGAGCCAGAGCTCGTTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAGTCATTTCCATTCCGTGATCAGCATTTCTTTGCATCAATTGAGAAAGCAAAGAGATTAGTTGGATGGGAACCTGAATTTGACCTTGTAGGAGGTCTTGCAGACTCATATAATCTGGACTTTGGCAGAGGAACATTCCGGAAAGAGGCTGATTTCTCTACAGATGACATTATTCTTGGGAAGAAACTTGTTAGTGTATAG 1137 0.4257 MARLVALQQNQLSFSPLASSLSDFSGTRLPTQLQLKRKLWQPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPVTQQLPGESDSDYADFSSKILHLKGDRKDFEFVKSSLSAEGFEVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLARAFVQVLGNDKASKEVFNISGEKYVTFDGLAKACAKAGGFPEPELVHYNPKDFDFGKKKSFPFRDQHFFASIEKAKRLVGWEPEFDLVGGLADSYNLDFGRGTFRKEADFSTDDIILGKKLVSV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2313 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Pvu1g2313 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 371 - -
Pvu1g2313 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 350 IPR036291 -
Pvu1g2313 378 CDD SDR_a1 54 307 - -
Pvu1g2313 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 51 371 - -
Pvu1g2313 378 Gene3D - 51 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2313 Pvu-Chr1 48578615 48582437 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2313 - - gmx:100799721 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2313 1 48578615 48582437 Pvu1g2313 1 48578615 48582437 ECH