Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2312 ATGACACCTAACATCACCACCGTTACTGTGAATGGCACCACTGAGCAACCCAAAGGTCGTAGTGGCCGTGCCTTTGTGACTTTCCTTGCTGGGAACGGTGATTACGTAAAGGGTGTGGTGGGTTTGGCCAAAGGGCTGAGAAAGGCCAAAAGCATGTACCCTTTGGTGGTTGCTGTGTTACCTGATGTTCCTGAAGAACATCGTATGATTCTGAAATCCCAAGGTTGCACTGTCAGGGAGATTCAACCTGTGTACCCACCTGAGAATCAGACACAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTACGTATATGGGAGTTTGTAGAGTACACCAAGATGATATACCTAGACGGTGACATCCAGGTTTTTGGAAACATTGACCACTTGTTTGATCTTCCTGATAGTTATTTCTATGCCGTCATGGATTGTTTCTGCGAGAAAACTTGGGGCCACAGCCCTCAGTACAAGATTGGTTACTGCCAACAGTGCCCTAATAAAGTTCAGTGGCCCTCTCATTTGGGTCCCAAACCTCCTCTATATTTCAACGCTGGTATGTTCGTCTATGAGCCTAATCTTGTCACTTACAGAGATCTTCTTCAAACCGTTCAAATCACCAAACCCACTTCTTTTGCTGAGCAGGACTTTCTGAACATGTACTTCAAGGACAAGTACAAGCCTATACCAAACTTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCCGAGAATGTTGAACTCGACAAAGTTCAAGTGGTTCATTATTGTGCTGCTGGGTCTAAACCTTGGAGATTCACTGGGAAGGAGGAGAACATGGAGAGGGAAGATATCAAGATACTTGTGAAGAAGTGGTGGGAGATATATGAAGATGAGACACTAGACTACAATAACAACAACTCTGTGAATGTGGAACGTTTCTCTTCAGCACTATTGGAGGCTGACATTCCACTTGTGTCAGCACCTTCTGCTGCATAA 984 0.4522 MTPNITTVTVNGTTEQPKGRSGRAFVTFLAGNGDYVKGVVGLAKGLRKAKSMYPLVVAVLPDVPEEHRMILKSQGCTVREIQPVYPPENQTQFAMAYYVINYSKLRIWEFVEYTKMIYLDGDIQVFGNIDHLFDLPDSYFYAVMDCFCEKTWGHSPQYKIGYCQQCPNKVQWPSHLGPKPPLYFNAGMFVYEPNLVTYRDLLQTVQITKPTSFAEQDFLNMYFKDKYKPIPNLYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRFTGKEENMEREDIKILVKKWWEIYEDETLDYNNNNSVNVERFSSALLEADIPLVSAPSAA* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2312 327 PANTHER GALACTINOL SYNTHASE 10 18 327 IPR030515 GO:0006012|GO:0047216
Pvu1g2312 327 Pfam Glycosyl transferase family 8 27 268 IPR002495 GO:0016757
Pvu1g2312 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 295 IPR029044 -
Pvu1g2312 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 297 IPR029044 -
Pvu1g2312 327 CDD GT8_Glycogenin 23 293 - -
Pvu1g2312 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 18 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2312 Pvu-Chr1 48570362 48572963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2312 1 327 Glycosyltransferase AT1G56600 74.631 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2312 K18819 - gmx:100800249 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2312 1 48570362 48572963 Pvu1g2312 1 48570362 48572963 ECH
Pvu1g2312 1 48570362 48572963 Pvu7g2093 7 44258087 44259736 PCT