Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2310 ATGGTTTGTGGCGGTGCATTCTCGCATCTCATTTTCACTGCTATTGCAATAGCAATAGCGATTCCATTGGGTGGCTGCGATACGCCTCCGGTGGTGTTTGTCTTCGGCGATTCCAACTCCGACACGGGTGGACTCGCTTCCGGACTCGGTTTCCCTATCAATCTTCCCAATGGCCGCACTTTCTTCCGCAGATCCACTGGTCGCTTGTCCGATGGACGCCTCGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATACTTGGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCTGTGGTGGGGTCCTCTACTCTCCCTAAGTATGTTCCTTTTTCCTTAAATATACAGGTCATGCAATACCGGCGTTTCAAAGCTCGTTCTCTCGAACTTGTTACGGCAGGTGCAAGAAATTTCATTAGTGACGAAGGCTTCCGCAATGCACTCTACTTGATTGATATTGGGCAAAACGACCTAGCTGATTCATTTGCTAAAAATCTGTCGTACGCACAAGTCATTAAGAAGATCCCATCATTTATAACTGAGATTGAGAATGCTGTTAAGAATTTACATAATGAAGGGGCCAGGAAGTTTTGGGTTCACAATACTGGGCCATTGGGCTGTCTTCCTAAAATACTTGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGCTATAACTCTGCAGCAAGATTGTTTAATGAAGCGCTGCTTCTTTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTTTAGTCTATGTTGATATTTATGGCATTAAGCATGACCTCATTACCAATGCCGCAAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGCTTTGGAGGGCCTCCTTACAACTTTGACGTAAGGGTAACATGCGGACAACCTGGTTATCAGGTTTGTGGCGAAGGGGCTCGATATGTAAGCTGGGATGGAATTCATCATACTGAAGCTGCAAATACGTTGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCGCGGACACCTTTTCATTTCTTTAGCCGCTCCTGA 1086 0.4503 MVCGGAFSHLIFTAIAIAIAIPLGGCDTPPVVFVFGDSNSDTGGLASGLGFPINLPNGRTFFRRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQYRRFKARSLELVTAGARNFISDEGFRNALYLIDIGQNDLADSFAKNLSYAQVIKKIPSFITEIENAVKNLHNEGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEALLLLSQKLRSELKDSTLVYVDIYGIKHDLITNAAKYGFSNPLMVCCGFGGPPYNFDVRVTCGQPGYQVCGEGARYVSWDGIHHTEAANTLIASKILSMAYSTPRTPFHFFSRS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2310 361 Gene3D SGNH hydrolase 28 349 IPR036514 -
Pvu1g2310 361 PANTHER OS01G0329900 PROTEIN 12 359 - -
Pvu1g2310 361 CDD SGNH_plant_lipase_like 30 345 IPR035669 -
Pvu1g2310 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 359 - -
Pvu1g2310 361 SUPERFAMILY SGNH hydrolase 32 345 - -
Pvu1g2310 361 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2310 Pvu-Chr1 48553696 48557329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2310 30 350 Acyl Lipid Metabolism Gene Families AT4G10950 26.316 2.01e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2310 - - gmx:100797617 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2310 1 48553696 48557329 Pvu1g2310 1 48553696 48557329 ECH