Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2306 ATGGGGTTTCAAAACTTGACCCTAACTTGTATGATGATATTGTGCATTAGTGTATATGTGAATTGCATCGATAATGTTGAACCTCATAATGAAACAGTTTCCCAAAGACCTAATGGTTTCATTCAACGAAATGGCAACCGTTTTTTTCTTAATGGGAAGCCACACTACTTCAATGGATTCAATGCCTATTGGCTAATGTCTTTTGCAGCCGATCCATCTACAAGTTCTAAGGTCACCACAGCTTTTCAAGAAGCTTCCAAATATGGTTTAAACTTAGCAAGAGCCTTTGCATTCAACGATGGAGGAGGTTACAAAGCCCTTCAAACTTCACCTGGCATTTATGACGAGAGTGTTTTCAGGGCATTGGATGCTGTGATATCAGAAGCAGGAAAATATGGGTGTCGATTGATTCTAAGCCTGGTAAATAATTGGAAAGATGCTGGTGGAAAGCATCAGTATGTTGAATGGGCAAATCAACGTGGACAGAAACTAAGGAGTGAAGATGACTTCTTCTCTAACTCCCTCACTAGGCAATTCTACAAAAATCATGTCAAGACTGTGTTGACAAGAAAAAATACAGTGAGTGGAATATTATACAAGGATGACCCAACCATTTTTTCATGGGAGCTCATGAATGAGCCTCGTTCTTTGGACTTATCTGGGAAACTAGTTCAGGATTGGGTGAGCGAGATGGCTGCTTATGTGAAGTCCATTGACAACGTTCACTTACTGCAAGTAGGGCTGGAAGGATTTTATGGTAGATCAATGGCAGGAAGACTAGAGTACAATCCTGGATACGAAGGAGGAACTGATTTCATTTCTAACAACCTTGTTCCTGAAATCGATTATGCCACCATTCATATCTACCCTACATGGATGTGGAGGTCTAACCAAACAGCCCAAAATGCGTTCATTGAAAGATGGATTAACATTCATAATGAAGATTCAGATAAGGTTTTACGAAAACCCATTCTTATTACGGAATTTGGGTTGTCTTCAAAAGTTCCAGGATACACAGTTGCGAAAAGGGACAAATTCTATGCAGAAGTATTCAATAGGATATATTTTAGCGCTAGTCACAGGGGAGCATGCGCAGGTGGAGCTTTTTGGCAACTTTTTGTCGAAGGAATGAATAACATGCGTGATGGTTATGAAGTCATCTTTCAAGAGACTCCTTCCACTACCCATCTCATATCTCAACAATCTTTTAGGATGTCACATATTCGATAG 1230 0.3992 MGFQNLTLTCMMILCISVYVNCIDNVEPHNETVSQRPNGFIQRNGNRFFLNGKPHYFNGFNAYWLMSFAADPSTSSKVTTAFQEASKYGLNLARAFAFNDGGGYKALQTSPGIYDESVFRALDAVISEAGKYGCRLILSLVNNWKDAGGKHQYVEWANQRGQKLRSEDDFFSNSLTRQFYKNHVKTVLTRKNTVSGILYKDDPTIFSWELMNEPRSLDLSGKLVQDWVSEMAAYVKSIDNVHLLQVGLEGFYGRSMAGRLEYNPGYEGGTDFISNNLVPEIDYATIHIYPTWMWRSNQTAQNAFIERWINIHNEDSDKVLRKPILITEFGLSSKVPGYTVAKRDKFYAEVFNRIYFSASHRGACAGGAFWQLFVEGMNNMRDGYEVIFQETPSTTHLISQQSFRMSHIR* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2306 409 PANTHER - 11 408 IPR045053 GO:0004553
Pvu1g2306 409 Pfam Cellulase (glycosyl hydrolase family 5) 52 335 IPR001547 GO:0004553|GO:0071704
Pvu1g2306 409 SUPERFAMILY (Trans)glycosidases 39 387 IPR017853 -
Pvu1g2306 409 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 11 408 - -
Pvu1g2306 409 Gene3D Glycosidases 37 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2306 Pvu-Chr1 48524073 48525837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2306 39 409 Glycoside Hydrolase AT1G02310 53.947 6.09e-143 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2306 K19355 - gmx:100788081 560.836