Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2297 ATGTCTTCCACCACCGATAACCATATCCACCAAAACAATCATCACAACGGTTCTCGCGTAGCCAAAAAGCCCAAACTCTCCTCCTTTATAACTGCGTCGGAAATCGAATCCGAATTCGGCCACCACGACGCCTCCGTCGCGCGCATCAACAACGGCAGCTTCGGCTGCTGCCCCGCCTCCATCATCGCCGCGCAGCACCGCTGGCAGCTCCGGTACCTCCGCCAGCCCGACCACTTCTACTTCAATGACCTCCAAACCGGCATCCTCCAATCGCGAACCCTAATCAAGGACCTCGTCAACGCGGACCACGTCGATGAGATCTCTATTGTCGACAACGCCACCACCGCTGCCGCCATCGTCCTCCAGCACGCCGCATGGAACTTCCGCGAAGGAAGATTCCAGAAAGGTGACGTCGTCCTCATGCTCCACTACGCTTACGGCGCTGTCAAGAAATCCATGGAAGCGTACGTCACTCGCGCCGGGGGTAATGTTGTCGAGGTTCCCCTCCCTTTCCCTGTTAACTCCAACGACGAGATCGTTTCCGAGTTTAGGAAGGCCTTGGAGAGAGGAAATAGTAACGGGAATAGGGTTAGGTTGGCGGTGATTGATCACGTGACTTCCATGCCGTGTGTGGTTATTCCTGTTAAGGAGTTGATTCAGATTTGCAGGGAGGAAGGGGTGGACCAGGTTTTTGTTGACGCTGCACATTCCATTGGGTGCACTGATGTTGACATGAAGGAAATTGGTGCTGATTTTTACACTAGTAATTTGCATAAGTGGTTCTTTTGTCCACCTTCAATTGCGTTTTTGTATACTCGTCGGAACCCTAAGGGTTCTGGTTCTGATTTGCATCACCCTGTGGTGTCTCATGAGTATGGCAATGGCTTGGCTGTGGAGAGTGCTTGGATTGGGACCAGGGATTATAGTGCACAGTTGGTTGTTCCTGCTGCGGTGGAGTTTGTTAACCGGTTTGAAGGGGGTATTGAGGGGATCAAGAAGAGGAATCATGAGGCTGTTGTGGAGATGGGTGAGATGTTGGCGAAGGCATGGGGTACTCGGCTCGGGAGTCCGGCGCATATGTGTGCTAGCATGGTTATGGTTGGTTTGCCTGCTTGTTTGGGGATTGGAAGTGATTCTGATGCTCTCGAGTTGAGAACACAATTGAGGGATGCTTTTGGGGTTGAAGTTCCGTTATATTATCGGCCCCCAAGAGAGGGGGAAGTTGGGGTGATTACTGGGTATGCGAGAATTTCTCATCAAGTGTATAACAAAGTTGATGACTATTACAAGTTCAGGGATGCGGTTAACCAACTTGTGCAAAATGGGTTTACTTGTGCTGCTGGTCTTTCGGGTTGA 1356 0.5133 MSSTTDNHIHQNNHHNGSRVAKKPKLSSFITASEIESEFGHHDASVARINNGSFGCCPASIIAAQHRWQLRYLRQPDHFYFNDLQTGILQSRTLIKDLVNADHVDEISIVDNATTAAAIVLQHAAWNFREGRFQKGDVVLMLHYAYGAVKKSMEAYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGNSNGNRVRLAVIDHVTSMPCVVIPVKELIQICREEGVDQVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRRNPKGSGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAAVEFVNRFEGGIEGIKKRNHEAVVEMGEMLAKAWGTRLGSPAHMCASMVMVGLPACLGIGSDSDALELRTQLRDAFGVEVPLYYRPPREGEVGVITGYARISHQVYNKVDDYYKFRDAVNQLVQNGFTCAAGLSG* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2297 451 MobiDBLite consensus disorder prediction 1 24 - -
Pvu1g2297 451 Pfam Aminotransferase class-V 84 366 IPR000192 -
Pvu1g2297 451 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 22 446 - -
Pvu1g2297 451 Gene3D - 59 323 IPR015421 GO:0003824
Pvu1g2297 451 PANTHER L-CYSTEINE DESULFHYDRASE 22 446 - -
Pvu1g2297 451 SUPERFAMILY PLP-dependent transferases 44 440 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2297 Pvu-Chr1 48459136 48461953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2297 K22207 - gmx:100786129 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2297 1 48459136 48461953 Pvu1g2297 1 48459136 48461953 ECH
Pvu1g2297 1 48459136 48461953 Pvu7g2108 7 44395623 44396945 PCT