Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2288 ATGGCTGACCATGATGCCACGGAAGAACAAAGGCCCCTCAACCAATGGAAGAGAAGTAAAGGGGGATTCATGGCTTCCATGTTCATTTTTGTCTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCATAGTCCTATACTTTTATGGAGTGATGCACTTTGATCTCGCCAGCTCAGCCAACACCCTCACAAACTTTATGGGTTCAACCTACTTGCTTTCCCTTGTTGGGGGCTTCATCTCAGATACTTACTTGAACAGATTCACCACATGCTTGCTTTTCGGATCACTAGAGGTTCTGGCTTTGGCAATGCTCACAGTTCAGGCTGCTTCAAATCATTTACACCCTGAAGCTTGTGGCAAGTCAAGCTGTGTCAAAGGTGGCATAGCAGGGATGTTTTACACATCACTGTGCTTGATGGCATTGGGAATGGGAGGGGTGAGAGGATCCATGACTGCATTTGGTGCCGACCAGTTTGATGAGAAGGATCCTACTGAGGCAAAAGCCCTTGCCAGTTTTTTCAATTGGCTTTTGATGAGTTCAACTGTGGGAGCAATAACAGGAGTCACTGGTGTTGTGTGGGTGAGCACCCAAAAAGCATGGCATTGGGGTTTTTTCATAATAACCATTGCTTCCTCTGTTGGATTTGTGACCCTTGCTCTTGGTAAGCCATTCTACCGCATCAAAACTCCAGGAGATAGCCCCACTTTGAGAATTGCTCAGGTTATTGTTGTGGCTTTTAAGAACCGAAAGTTGTCACTGCCGGAGTCACATGGGGAACTATATGAAATCAGTGATAAAGATGCTACAGCAGAGAAGATTGCCCACACCAGCCAAATGAGGATTCTAGACAAAGCGGCCATTATCCAAGAAAACTCAAAACCCCAAGCATGGAAAGTGTGCACAGTGACACAGGTCGAAGAAGTCAAGATCCTAACAAGAATGTTACCCATAGTAGCAAGTACCATTATACTGAACACCTGTATGGCACAACTTCAAACATTCTCAGTTCAACAAGGGAATATAATGAACCTAAAACTTGGGTCTCTAACAGTGCCTGCACCATCCATTCCTGTTATCCCCCTTGTGTTCATAAGTGTCCTAGTTCCCTTGTATGAACTATTTTTTGTGCCATTTGCAAGAAAGATCACTCAACACCCTTCAGGCATAACACAACTCCAAAGGGTAGGGGTGGGGTTGGTACTCTCAGCAATATCAATGGCAGTGGCTGGGATTGTGGAAGTGAAGAGAAGGGATCAAGGAAGGAAAGACCCTTCTAAGCCTATAAGCCTATTTTGGCTTTCATTCCAGTATGGTATATTTGGCATTGCAGACATGTTCACCCTTGTGGGATTATTGGAATTCTTTTACAGGGAATCACCTGCTAGCATGAAATCACTTTCAACCTCTTTAACGTGGTTGTCAACATCCCTTGGTTACTTCTTGAGCACAGTCTTTGTGAATGTCATAAATGCTGTCACCCAAAGGATCACTCCAAGCAAACAAGGGTGGTTGCATGGATTCGACTTGAACCAAAACAACCTTAACTTGTTCTACTGGTTCCTAGCCGCCCTTAGTTGCCTTAACTTTTTTAACTACCTCTATTGGGCCTCAAGGTACAAGTACAAACGTGAAGACTCTGGTCCAGGTTTTAAGGGTTTAGGTGAAATGCCTCTGAATGGTTGA 1695 0.4442 MADHDATEEQRPLNQWKRSKGGFMASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMGSTYLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASNHLHPEACGKSSCVKGGIAGMFYTSLCLMALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLMSSTVGAITGVTGVVWVSTQKAWHWGFFIITIASSVGFVTLALGKPFYRIKTPGDSPTLRIAQVIVVAFKNRKLSLPESHGELYEISDKDATAEKIAHTSQMRILDKAAIIQENSKPQAWKVCTVTQVEEVKILTRMLPIVASTIILNTCMAQLQTFSVQQGNIMNLKLGSLTVPAPSIPVIPLVFISVLVPLYELFFVPFARKITQHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRKDPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSLTWLSTSLGYFLSTVFVNVINAVTQRITPSKQGWLHGFDLNQNNLNLFYWFLAALSCLNFFNYLYWASRYKYKREDSGPGFKGLGEMPLNG* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2288 564 Gene3D MFS general substrate transporter like domains 2 550 IPR036259 -
Pvu1g2288 564 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 553 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2288 564 SUPERFAMILY MFS general substrate transporter 3 546 IPR036259 -
Pvu1g2288 564 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 553 - -
Pvu1g2288 564 Pfam POT family 91 505 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2288 Pvu-Chr1 48364698 48368616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2288 17 550 Organic Solute Cotransporters AT1G69850 41.975 2.69e-148 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2288 K14638 - gmx:100781861 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2288 1 48364698 48368616 Pvu1g2288 1 48364698 48368616 ECH
Pvu1g2288 1 48364698 48368616 Pvu7g2123 7 44563829 44567241 PCT