Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2278 ATGCTGCGTCTGAAAGCGTTTCGGCCTACGAACGAAAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACCGCCGATGATTCAGATCGAGTTTCGGTTTGGAACTGGGAGCACCGCCAGGTGGTGTATGAGTTGAAAGCTGGTGGAGTGGACGAGCGGCGTTTGGTCGGCGCCAAGTTGGAGAAGCTGGCCGAGGGAGAAACAGAGTCTAAAGGGAAGCCTACGGAAGCCATTCGGGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGTTCTGCAGCTGCTGAGGCTCCAACAGCTGTCCACACTTCAGCTTTTAGCTCTCCTGCTCCATCAACAAAAGGGAGACATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTTTGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCAGATGGTGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCTATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGCGAGGCTCTTCTGGTTTCGGGCGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGACCACGGACAGGATTCACGTGAACTTGTACCCAAGCTGAGTTTGAAAGCACATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAGGGTAATGGGAGGTGCTCCTCAGCTAATCACAATTGGTGCAGATAAGACATTAGCCATATGGGACACTGTGTCCTTTAAGGAGCTGCGGCGTATAAAGCCAGTTCCCAAATTGGCTTGCCATAGTGTAGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGACATTCTAACCTGCGTCAAAGATTCTCACATATGGGCAATCGAACATCCCACTTATTCTGCTCTCACGAGGCCATTGTGTGAATTGACCTCAGTTCTTCCTCCAAACGCCCTTGCTCCTAATAAGAAATTGAGGGTGTATTGTATGGTTACACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTATCTGTGAGTTTGATGCTAGATCTCTTCCACCTGTAGCTCCACTACTAACTCCAGCAGACAGTAGAGAGCATTCAGCTGTATTTGTAATTGAAAGGGAATTGAAGCTATTAAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAACAGTTCCTTGTCAGAAACAGGAAGACCCAAGGGAGACTTTTTTGAACCATTACCTGTCAAGCAGGGGAAAAAGCACATTAGTACTCCTGTTCCTCATGATTCGTACTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTACTTTTCTGTCTACAAGGTTAGTGATTGGTCAATTGTTGACTCTGGAAGTGCAAGGCTTCTGGCATGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCAACATTACCTCCTAGACTTCCTATAATTCCAAAGGGTAGTTCATCAAAAAGAGCCAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCAGCTGCTGCTGCTGCTTCCACAGCTTCTGTTCAAGTCCGCATCTTGTTAGATGATGGTACATCAAACATACTAATGAGGTCCGTTGGCGCACGCAGTGAACCAGTCATTGGTTTGCGTGGAGGAGCACTGCTCGGTGTTGCGTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCCACAGCTATTTCAACAATCCAGTCTATGCCCTTATCAGGCTATGGAAGCAGTGTTTCTTCTTTTACTACTTATGATGATGGATTTTCTTCAAATAGACCTCCAACCACAGCAGCACCTCAAAACTTCCAGTTATACAGTTGGGAGACATTCCAGCCAGTGGGGGACCTTCTTCCTCAACCAGAATGGACTGCTTGGGACCAAACCGTTGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTCTTTGCGCCCTCAATATAGATATTTGGGAGATGTTGCAATCCCATATGCAACCAGTGCTGTTTGGCACAGGAGGCAACTATTTGTGGCTACCCCAACTACTATCGAAATTGTTTTTGTGGACGCAGGGATTGCCCAAATTGACATTGAAACTAGGAAGATGAAAGAAGAGCAGAAGATGAAAGAAGCGCAGGCAAAAGCTGTTGCAGAGCACGGAGAGTTAGCACTAATTAGTGTAGAAGGTCCTCAGTCTACTAAAGAAGAAAGAATAGCATTGAGGCCACCGATGTTGCAGGTGGTTCGGTTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTCTTAACATTACCGAAACAATCTAGAGTTGATGGTGATGACTCTTGGACGGCAGCAGAAGAGAGAAAGGCAGGTGAGGTGGCAGTTGGAGGTGGGGGTGTGTCTGTGGCAGTTACCCGTTTTCCAATGGAGCAGAAACGTCCAGTTGGGCCTCTTGTAGTTGTAGGTGTCAAGGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCCCATGCCTTATCCTTGAGTCATCCTGGTATTCGCTGCCGATGCCTTGCTGCTTACGGAGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGACTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAAAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACAAGATGATACACCTGGGCTTGGTTTGAATGACATTCTTAATTTATCAGATAAAAAACAAGAGAAAATATCAGATAAAAAACAAGATATGGTAGAAGGTGTTCAGGGTATAGTGAAATTTGCGAAAGAATTCTTGGATCTTATTGACGCTGCAGATGCTACTGCACAGAGTGAAATAGCCCGTGAGGCTCTCAAGAGGTTAGCTACAGCAGGTTCGGTGAAAGGTGCTTTAGAAGGTCATGAATTGAGAGGATTAGCATTACGTCTTGCAAATCATGGAGAGTTGACTCGTCTAAGTGGTTTGGTAAACAACTTAGTCACCCTTGGCTTGGGACGGGAAGCAGCATTCGCTGGTGCTGTTTTGGGTGACAATGCTCTGATGGAGAAAGCATGGCAGGACACTGGAATGCTGGCAGAGGCCGTGCTTCATTCTCATGCACATGGACGTCCAACTTTGAAGAACTTAGTTCAGGCTTGGAACCAAGCGCTACAGAGAGAGATTGAACCTACCCCATCTCAGAAGACAGATGCCGCAGCTGCGTTTTTAGCTTCTCTTGAGGAGCCTAAGCTCACGAGTTTGGCAGATGCTGGGAAGAAAGCGCCTATTGAAATCCTGCCTCCGGGGATGATGTCTCTTAATGCTCCTATTTCCATCCAGAAAAAACCAGCTTCTGCTACACAGAATTCCCAACAACCCCCAGAAAAGCAGTTGGCACTGGAAGCACCTCCTACAACCACAGCTGCACCAGAGAGTGCTACACAGCAGCCTGAATCTACACCAGCATCCGTTACTGATCCACCTCCAGCAGAGTCTACCTCCTCAGACTCCACGCCAGCTCCTGTAGCTTCCCCACCTCAACAAGAATCAGGTGAAACCACAGTAGACGATGGGGCTCCTACCACTGGATCAGCTATTGACGGAGATCCAAATGTTAATGGTGAAACTAGTCAAGCAGAAGCGTCTACCAGCAATCCAGCAACCCCAGAGGTTCCACCACCTCCAGTAGCAGCAGAGGTTTTGGAGACTTCTACTCCAACTACAGCTGCAGTGCCTACAATAACTACAGTTCCCTCAAATGATCCCTTTATATGA 4029 0.4609 MLRLKAFRPTNEKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVLPPNALAPNKKLRVYCMVTHTLQPHLVATGTNIGVIICEFDARSLPPVAPLLTPADSREHSAVFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESTLPPRLPIIPKGSSSKRAKEAAAAQAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARSEPVIGLRGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSVSSFTTYDDGFSSNRPPTTAAPQNFQLYSWETFQPVGDLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGIAQIDIETRKMKEEQKMKEAQAKAVAEHGELALISVEGPQSTKEERIALRPPMLQVVRLASFQHAPSVPPFLTLPKQSRVDGDDSWTAAEERKAGEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVKDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGQDDTPGLGLNDILNLSDKKQEKISDKKQDMVEGVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLATAGSVKGALEGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAGAVLGDNALMEKAWQDTGMLAEAVLHSHAHGRPTLKNLVQAWNQALQREIEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKAPIEILPPGMMSLNAPISIQKKPASATQNSQQPPEKQLALEAPPTTTAAPESATQQPESTPASVTDPPPAESTSSDSTPAPVASPPQQESGETTVDDGAPTTGSAIDGDPNVNGETSQAEASTSNPATPEVPPPPVAAEVLETSTPTTAAVPTITTVPSNDPFI* 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2278 1342 Coils Coil 751 771 - -
Pvu1g2278 1342 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Pvu1g2278 1342 PANTHER TSET COMPLEX MEMBER TSTF 1 1331 - -
Pvu1g2278 1342 SUPERFAMILY WD40 repeat-like 8 497 IPR036322 GO:0005515
Pvu1g2278 1342 MobiDBLite consensus disorder prediction 1198 1342 - -
Pvu1g2278 1342 MobiDBLite consensus disorder prediction 1198 1214 - -
Pvu1g2278 1342 PANTHER BNAC07G49640D PROTEIN 1 1331 - -
Pvu1g2278 1342 MobiDBLite consensus disorder prediction 1319 1342 - -
Pvu1g2278 1342 Gene3D - 902 1159 - -
Pvu1g2278 1342 SMART WD40_4 1 39 IPR001680 GO:0005515
Pvu1g2278 1342 SMART WD40_4 198 241 IPR001680 GO:0005515
Pvu1g2278 1342 SMART WD40_4 250 292 IPR001680 GO:0005515
Pvu1g2278 1342 Gene3D - 3 348 IPR015943 GO:0005515
Pvu1g2278 1342 MobiDBLite consensus disorder prediction 1225 1304 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2278 - - gmx:100786844 2357.02