Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2274 ATGATGGTGGCAAGTGAGCTACAAGGACTGTCCATGCCCCTGGGTACAAAGAAACCAGCCTTCCACCATGACAAGAATTTGTCTTCCTCATTCTCTTGTAGCAGAGTGAACTTGCTTCAATCAAAGAATGTAGTATCTGGTTTTCCTTCAGGAAAATTCTTTAGTGTTGTTACACGCAGAAAAACAACCAGAAGATTTTTGGCTATGTCCACTCTTGCAGATGTTGCAAATGATTTTATGGCCCTTCAATCACCAATACTTACAGGAAGAGAAGCCAACCCCAAGACTGTTGCATCGATCATATTAGGCGGAGGAGCTGGAACTCGTCTATTCCCCCTTACTCAAAGAAGGGCTAAACCTGCAGTACCATTTGGAGGATGCTATAGATTGGTGGACATACCGATGAGTAATTGCATTAACAGTGGAATTAACAAAATTTACGTCCTCACACAATTTAACTCTCAGTCCCTCAACCGACATATTGCTCGAACATATAATTTGGGAGGTTGCATAAACTTTGGAGGTGGTTTCGTTGAGGTATTGGCTGCAACTCAAACACCTGGTGAATCAGGAAAAAACTGGTTTCAGGGTACAGCTGATGCTGTAAGACAATTCCTTTGGTTGTTTGAGGACGCTGATCATAAAAATATAGAGAACATTCTGATATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGACATTGTGCAGAAGCACATTAATTCTTGTGCTGATATATCAGTATCTTGTCTCCCAGTGGATGGCAGTCGGGCCTCTGATTTTGGATTAGTGAAGGTTGATGAAAGAGGACGGATATGTCAGTTCTTAGAAAAACCCAAGGGCGAATTGTTAAGATCTATGCATGTAGATACGAGTATTTTCGGACTATCAGCTCAAGAAGCAAGGAAATTTCCGTACATCGCATCAATGGGTATATATGTGTTTAAAATAGATGTTCTGCTAAAAGTTCTCAGGGGCTGTTATCCTAATGCAAATGATTTTGGATCTGAGGTCATTCCCTTGGCTGCAAGAGATTTTAATGTCCAGGCTTGTCTTTTCAATGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCGAATTTGGCTCTTATGGACCAGCCGCCCAAGTTTCAGTTTTATGACCAGTCCAAGCCTATTTTTACTTGTCCTCGGTTCCTACCACCAACTAAAATGGAGAAGTGTGAGGTAATTAACTCTTTGATTTCAGATGGTTGCTTTTTGAAAGAGTGCACAGTTGAACATTCCATTGTGGGAATTCGATCACGGCTTGATTCTGGAGTGCAGATAAAGGATACCATGATTATGGGTGCTGATTATTACCAAACAGAAGCTGAAATTGCTTCTCTTTTAGCAGCAGGAAATGTTCCAATAGGCATTGGGAAAAATACAAAAATTGTGAATTGTATAATTGACAAAAACGCAAGAATTGGAAACAGTGTAATTATTGCAAACAAAGACAATGTGCAGGAAGCAGACAGAGGATCAGAGGGGTTTTATATTCGATCAGGAATCGTTGTGGTGTTAAAAGACTCTGAAATACCCAATGCTACAATCATTTAA 1593 0.4011 MMVASELQGLSMPLGTKKPAFHHDKNLSSSFSCSRVNLLQSKNVVSGFPSGKFFSVVTRRKTTRRFLAMSTLADVANDFMALQSPILTGREANPKTVASIILGGGAGTRLFPLTQRRAKPAVPFGGCYRLVDIPMSNCINSGINKIYVLTQFNSQSLNRHIARTYNLGGCINFGGGFVEVLAATQTPGESGKNWFQGTADAVRQFLWLFEDADHKNIENILILCGDQLYRMDYMDIVQKHINSCADISVSCLPVDGSRASDFGLVKVDERGRICQFLEKPKGELLRSMHVDTSIFGLSAQEARKFPYIASMGIYVFKIDVLLKVLRGCYPNANDFGSEVIPLAARDFNVQACLFNGYWEDIGTIKSFFDANLALMDQPPKFQFYDQSKPIFTCPRFLPPTKMEKCEVINSLISDGCFLKECTVEHSIVGIRSRLDSGVQIKDTMIMGADYYQTEAEIASLLAAGNVPIGIGKNTKIVNCIIDKNARIGNSVIIANKDNVQEADRGSEGFYIRSGIVVVLKDSEIPNATII* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2274 530 CDD LbH_G1P_AT_C 398 524 - -
Pvu1g2274 530 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 4 530 - -
Pvu1g2274 530 CDD ADP_Glucose_PP 100 361 - -
Pvu1g2274 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 309 319 IPR005836 GO:0005978|GO:0008878
Pvu1g2274 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 194 202 IPR005836 GO:0005978|GO:0008878
Pvu1g2274 530 SUPERFAMILY Trimeric LpxA-like enzymes 394 530 IPR011004 -
Pvu1g2274 530 Pfam Nucleotidyl transferase 99 375 IPR005835 GO:0009058|GO:0016779
Pvu1g2274 530 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 491 IPR029044 -
Pvu1g2274 530 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 395 IPR029044 -
Pvu1g2274 530 Gene3D Hexapeptide repeat proteins 396 530 - -
Pvu1g2274 530 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 98 494 IPR011831 GO:0005978|GO:0008878
Pvu1g2274 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 103 122 IPR005836 GO:0005978|GO:0008878
Pvu1g2274 530 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 4 530 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2274 Pvu-Chr1 48238848 48245168 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2274 K00975 - gmx:100805739 986.867