Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2273 ATGGGTTGGCATGGATGTCTCAAAAGTATGGTCTTGATGGTTGCTTTTATGGTGGCCATGGTGGTTGTTCAACACGTGAAGTGCGAGGAAGGTGGTGATCATGTTCATGACTCAGCACGCAAATTAGTTCAGAGTGGTGGCTTCGTTCGACGAAGTGGCACCAACTTTGTTCTGAACAACAAGCGTTTCTACTTCAACGGATTCAACGCTTACTGGTTAATGTTTATGGCATCTGATCCATCCACAAGGCCCAAGGTCGCTTCCATTTTGCAAGAAGCTTCCAGCCATGGCTTAACTGTTGCTAGAACTTGGGCTTTCAATGATGGAGCTTACAGAGCCCTTCAGGTTTCTCCTGGTTCCTACGACGAGAAAGTATTCCGGGGTTTGGACTTTGTGATATCAGAAGCAGGAAAAAATGGGGTACGGTTGATACTGAGCTTGGTGAACAACTGGAAAGATTTTGGTGGGAAAAATCAGTATGTGGAATGGGTAAAGAAGGAGCATGGCGAGTACGTGAACAGTGAAGATGATTTCTTTACGCATCCTGTAGCCAAGCAACACTTCAAAAACCATATCAAGGCTGTGCTGACAAGAAAAAACGCAGTAAGTGGGGTGGCATATAAGGACGATCCTGCCATATTTGCATGGGAACTTATGAATGAACCCCGTTGCCAACAAGCCAACTCTGGAAAAGTTATTCAGGAATGGGTGATTGAGATGGCTGCATACGTCAAATCCATCGATAGTAATCATTTGCTTGAAATAGGACTGGAAGGGTTCTATGGTGAAGGAAAAAAACAATTAAATCCTGGGTATCAACTTATTGGCACTGATTTCATTTCTAACAACCTAGTTCACCAAGTCGATTTTGCTACCATGCATCTCTACCCTGAACAATGGCTGCCAGGTTCAAATGAAGCTGCTCAGGTTGCATTTGTTGACAAGTGGCTACAGACACACATTGAGGATGCGAAAAATGTTCTGGGGAAACCTGTTGTTGTTGGTGAGTTTGGGAAGTCTTGTAGGTCATACAGTGTGGCTGAAAGGGACAGTTACTTGAGCAAAATGTATAATGCCATATACAGTAGTGCTAGCAGTGGGGGACCCTGTGCTGGAGGGCTTTTTTGGCAGCTCATGGCTCAAGGAATGGATAATTTCTATGATGGTTATGAAGTTGTCTTCCAGACAAGTCCTTCAACTACCAGAATTATTGATCAACAATCCCACAAAATGTCAAGTATTGCTTAG 1248 0.4383 MGWHGCLKSMVLMVAFMVAMVVVQHVKCEEGGDHVHDSARKLVQSGGFVRRSGTNFVLNNKRFYFNGFNAYWLMFMASDPSTRPKVASILQEASSHGLTVARTWAFNDGAYRALQVSPGSYDEKVFRGLDFVISEAGKNGVRLILSLVNNWKDFGGKNQYVEWVKKEHGEYVNSEDDFFTHPVAKQHFKNHIKAVLTRKNAVSGVAYKDDPAIFAWELMNEPRCQQANSGKVIQEWVIEMAAYVKSIDSNHLLEIGLEGFYGEGKKQLNPGYQLIGTDFISNNLVHQVDFATMHLYPEQWLPGSNEAAQVAFVDKWLQTHIEDAKNVLGKPVVVGEFGKSCRSYSVAERDSYLSKMYNAIYSSASSGGPCAGGLFWQLMAQGMDNFYDGYEVVFQTSPSTTRIIDQQSHKMSSIA* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2273 415 PANTHER - 14 414 IPR045053 GO:0004553
Pvu1g2273 415 SUPERFAMILY (Trans)glycosidases 48 405 IPR017853 -
Pvu1g2273 415 Pfam Cellulase (glycosyl hydrolase family 5) 66 352 IPR001547 GO:0004553|GO:0071704
Pvu1g2273 415 Gene3D Glycosidases 44 415 - -
Pvu1g2273 415 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 14 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2273 Pvu-Chr1 48233258 48236867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2273 10 414 Glycoside Hydrolase AT5G66460 53.659 1.29e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2273 K19355 - gmx:100787923 724.161