Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2268 ATGGATACTTCTTGCGGGATTGCTGGAATCAAGTATGATTGCTTGCTTTTCGATATGGACGATACTCTCTATCCATTGAGCTCAGGTCTCAATTTGGCATGTCGGAAGAACATAGAAGAGTACATGTTAAAACACTTGCATATGGACGAAAGTAAAGTACCAAAGATTTGCCTGGACTTCTACAAGGAATATGGGACAACTATGGCAGGACTAAAGGCTTTTGGTTATGAGTTTGATGATGATGAATTTCATGCCTACGTGCATGGAAGACTACCATACGGGAACCTGAAGCCAGATCCAGTGTTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATTGTATTCACTAATGCAGATGAAGCACATGCACACCAAGTGCTCAACAGATTGGGCTTGGTAGAATGTTTTGACAGTATCATATGCTTTGAAACGCTTAATCCCCCTAATCACGCAAATGTAACAACTGATAATCGCGTGCTAGCATGGAGTAACTCGTTGAACAAAGAATACTGTAACCAGGTAGAGAGTGAATGTTTCAACTCCAAGACACAAATCCTCTGCAAACCCTCTGTTGAAGCCATTGAAGCCGCCATTCACATTGCTAATGTAGATCCAAGGAAAACGTTGTTCTTTGATGACAGTGCTAGAAACATTGCAAGTGGGAAAGCTGCTGGACTTAACACGGTTATTGTGGGACGCTCAGATTTGGTGCCGGGAGCTGACCATGCACTGAACAGCATTCATAACATCAAAGAAGCGTTACCCGAGATATGGGAGGTTGAGGGAGACCAACAGCAAATTATCCAATCTCAAGCAGTTGAAACCATGGTCCTTGCATAG 843 0.4306 MDTSCGIAGIKYDCLLFDMDDTLYPLSSGLNLACRKNIEEYMLKHLHMDESKVPKICLDFYKEYGTTMAGLKAFGYEFDDDEFHAYVHGRLPYGNLKPDPVLRNLLLSMPQRKIVFTNADEAHAHQVLNRLGLVECFDSIICFETLNPPNHANVTTDNRVLAWSNSLNKEYCNQVESECFNSKTQILCKPSVEAIEAAIHIANVDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGADHALNSIHNIKEALPEIWEVEGDQQQIIQSQAVETMVLA* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2268 280 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 11 261 - -
Pvu1g2268 280 PANTHER OS07G0634400 PROTEIN 8 280 - -
Pvu1g2268 280 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 8 280 - -
Pvu1g2268 280 SUPERFAMILY HAD-like 14 236 IPR036412 -
Pvu1g2268 280 SFLD C1.5.3: 5'-Nucleotidase Like 11 261 IPR010237 -
Pvu1g2268 280 Gene3D - 77 259 IPR023214 -
Pvu1g2268 280 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 186 232 IPR006439 -
Pvu1g2268 280 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 232 IPR010237 -
Pvu1g2268 280 CDD HAD_5NT 14 234 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2268 Pvu-Chr1 48191243 48193902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2268 K18551 - gmx:100786323 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2268 1 48191243 48193902 Pvu7g2139 7 44664087 44666746 PCT