Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2250 ATGAGATTTCGTGGGAGCTTTATATTTCGCCGTTTTCTTTCTCAGTTTCGAAAGCAATTCGATTCAAAGTCCGAATTCCCAGTTCCCAATTTCCGGAGTCGAGCTCCGTTCTTCCTTCGTTCTTATTCTTCCGAAGTGCAAGCTCCACTGTCCCCTCAGCTCTTGAACATAATGGAACAAAGACTCTCCGCAGTTGAGCACAGGACTGCATATCTAAACAAACTTCTAAATCAGCCAGAAGCATCGCCATCAGAATACGCGAGAACTAACAAGGAGCTTCGGAAGCTAAGTGGTTCTGTGGACCTTATTAATGAATTGAGGACCATACAGAAGGAAATTGATGGCTTGAAGTCACTAATCGAGGAATGTTCTGAGGATAAAGACATGCTTAATATGGCTACAGAGGAAATGGCTCAGGCCATAGAAGAAGAAAGAAGACTGCAAAATTTGCTGCTGAAGTCATTACTTCCTAAGGACGATGCTAATGAAAGGGATTGCATTTTGGAGGTACGAGCAGGTACTGGTGGGGAGGAGGCTTCCCTGTTTGCAATGGATATCTTTAGAATGTATGAGAAGTACGCTCTCAAGAAAGGCTGGAAATTTGAAGTAGTAGATATAGCTCAATCTGATCTGAAAGGTAGAATTGAATATCATCCTGCAATTGATGTAGTTTGGACTATTCTTTCGCAGGAGGCTAGTGCAGCAATTGCAGGAGTTGGTGTTTATGGGAAACTAAAATTTGAGAGTGGAATCCATCGTGTCCAGCGAGTTCCTGTGACAGAAAAGTTGGGAAGAATTCATACCAGTGCTGTTTCTGTTGCAATTCTTCCTCAGGCTGATGAGGTGGACGTTCAATTGAAGAATGAAGACTTAAGAATCGACACCTATAGATCTGGTGGTTCAGGTGGTCAGCATGCAAATACAACCAACAGTGCTGTTAGAGTAACCCACATTCCAACAGGGATTATGATTACTATACAAGATGAGCGGTCTCAACATATGAACAAGGCCAAAGCTCTCAAGGTACTCTGTGCAAAACTATATGAAATGGAAAGGCTAAGACTTCATAGAAGTCGATCAAAGCTTCGATCAGAGCAGATTGGTAGTGGGGATAGATCTGAACGCATCAGAACGTACAATTTCCCTCAGGGCCGGGTAACTGATCATAGAGTTGGTATCACTTATCACTCGGTAGATGATGTGATGCAAGGTGAAAATCTTGATGTCTTCATTGATGCCCTTCTACTACAGGAAGAAATGGATGCAATAGCAACTTTTAGTTCGTCTTAG 1290 0.4256 MRFRGSFIFRRFLSQFRKQFDSKSEFPVPNFRSRAPFFLRSYSSEVQAPLSPQLLNIMEQRLSAVEHRTAYLNKLLNQPEASPSEYARTNKELRKLSGSVDLINELRTIQKEIDGLKSLIEECSEDKDMLNMATEEMAQAIEEERRLQNLLLKSLLPKDDANERDCILEVRAGTGGEEASLFAMDIFRMYEKYALKKGWKFEVVDIAQSDLKGRIEYHPAIDVVWTILSQEASAAIAGVGVYGKLKFESGIHRVQRVPVTEKLGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLRLHRSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLDVFIDALLLQEEMDAIATFSSS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2250 429 Gene3D - 53 160 - -
Pvu1g2250 429 Gene3D - 279 374 - -
Pvu1g2250 429 PANTHER LD18447P 34 427 - -
Pvu1g2250 429 Pfam RF-1 domain 280 390 IPR000352 GO:0003747|GO:0006415
Pvu1g2250 429 SMART PCRF_a_2 118 248 IPR005139 GO:0006415
Pvu1g2250 429 PANTHER LD18447P 34 427 - -
Pvu1g2250 429 Pfam PCRF domain 66 273 IPR005139 GO:0006415
Pvu1g2250 429 SUPERFAMILY Release factor 69 418 IPR045853 -
Pvu1g2250 429 Gene3D - 168 411 - -
Pvu1g2250 429 Coils Coil 106 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2250 Pvu-Chr1 48041238 48045445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2250 K02835 - gmx:100800412 683.715