Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2236 ATGCCGAAACAAAGGTTGGAGGGTAAGGTGGCTCTTATCACCGGGGCAGCAAGTGGTATTGGAGAAGAGACAGTGAGATTGTTCGCAGAACATGGAGCAGTTATTGTGGCAGCAGATATTCAAGATGAGCAAGGTCAAAAAGTTGCTGCTTCACTAGGGCCAGAGAGAGTGACTTACCACCATTGCGATGTGAGAGATGAAAACCAAGTTGAAGAAACCATCAACTTCACTTTGGAAAAACATGGTCGAATAGATATTTTGTTCAGCAACGCAGGCATCATAGGTTCTCTATCTGGGATCCTTGACCTTGATCTGAATGAGTTTGACAACACCATGGCCACAAATGTTCGCGGTGTAGCCGCCACAATTAAGCACTCAGCACGTGCTATGGTTGCCAAAAGCATCCGTGGATCCATCATATGCACCACCAGTGTGGCTGCCACAGTTGGTGGAACAGGTCCTCATGGTTATACCACATCAAAACATGCTCTCACGGGGTTGGTGAAATCAGCTTGTAGTGAACTCGGAGCATATGGAATAAGAGTTAACAGCATATCCCCATTTGGAGTAGCCACGCCTCTTGCATGCAGGGCTTTCAACTTTGAACCTGAGCAAGTTGAAGCTAATAGCTGCTCACAAGCCAACCTCAAGGGTGTGGTACTGAAGGCTAAGCATATAGCAGAAGCAGCTTTGTTTCTTGCTTCTGATGAAGCAGTTTACATAAGTGGTCACAACTTGGTGGTGGATGGTGGCTTCTCTGTGGTTAACAGAAGTTATTTTTCCACACCTGTTGACGTGTAG 801 0.4632 MPKQRLEGKVALITGAASGIGEETVRLFAEHGAVIVAADIQDEQGQKVAASLGPERVTYHHCDVRDENQVEETINFTLEKHGRIDILFSNAGIIGSLSGILDLDLNEFDNTMATNVRGVAATIKHSARAMVAKSIRGSIICTTSVAATVGGTGPHGYTTSKHALTGLVKSACSELGAYGIRVNSISPFGVATPLACRAFNFEPEQVEANSCSQANLKGVVLKAKHIAEAALFLASDEAVYISGHNLVVDGGFSVVNRSYFSTPVDV* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2236 266 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3 259 - -
Pvu1g2236 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
Pvu1g2236 266 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Pvu1g2236 266 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Pvu1g2236 266 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Pvu1g2236 266 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Pvu1g2236 266 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Pvu1g2236 266 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Pvu1g2236 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Pvu1g2236 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Pvu1g2236 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Pvu1g2236 266 Gene3D - 1 260 - -
Pvu1g2236 266 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Pvu1g2236 266 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2236 Pvu-Chr1 47951066 47952441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2236 2 262 Acyl Lipid Metabolism Gene Families AT3G55290 29.710 6.98e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2236 - - gmx:100811279 480.33