Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2227 ATGGCCCCAGAGCTTGTCCCCACCGTTGCAAAATCTACTGCCTCATTCACCAGCCCTCCCATCCTGCCACCGCGTGCCTACGTCACATTTCTTGCCGGGAATGGTGACTACGTCAAAGGAGTGGTTGGTCTCATCAAAGGGTTGCGAAAGGTCAAAGCTGCGTATCCATTGGTGGTGGCTGTCCTCCCTGATGTGCCGGAGGAGCACCGTGAGATCCTCAAGTCGCAGGGCTGCATTGTCCGTGAGATTGAACCTGTTTACCCGCCAGAAAATCAGACACAGTTCGCAATGGCTTATTACGTCATCAACTACTCCAAGCTCCGTATATGGGAGTTTGTGGAATACAGTAAGATGATATATTTGGACGGAGATATTCAGGTATTTGAGAACGTAGACCACTTATTTGACCTACCAGATGGTAACTTTTACGCTGTGATGGACTGTTTCTGTGAGAAGACATGGAGTCACACTCCTCAGTACAAGGCTGGGTACTGCCAGCAGTGTCCGGAGAAGGTGCAGTGGCCCACCGAATTGGGCCAGCCTCCTGCTCTTTACTTCAACGCCGGCATGTTCCTGTTTGAACCTAATATGGTCACTTATCATGACCTACTGAAAACGCTGAAAGTCACTACTCCCACGTCCTTTGCCGAACAGGACTTCTTGAACATGTATTTCAAGAACATTTACAAACCAATTCCTGTGTCCTACAACCTTGTCCTCGCCATGCTTTGGCGCCACCCAGAAAATGTTAACCTTGAGGAAGTCAAGGTTGTTCACTACTGTGCAGCGGGGTCGAAACCTTGGAGATATACTGGACAAGAAGAGAATATGCAGAGGGAGGATATAAAGATGCTGGTGCATAAATGGTGGGACATCTACAATGATGTTTCTCTTGACTACAAACCATTATGTGCAAGTGAAACTCCAGTGGATGATGTTGACCTGGAACCATTGGAACCGATGGGGCATCTATCAAAGATTCAGGGACTGATCGTGCCTTGCTTCTGA 1008 0.4831 MAPELVPTVAKSTASFTSPPILPPRAYVTFLAGNGDYVKGVVGLIKGLRKVKAAYPLVVAVLPDVPEEHREILKSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENVDHLFDLPDGNFYAVMDCFCEKTWSHTPQYKAGYCQQCPEKVQWPTELGQPPALYFNAGMFLFEPNMVTYHDLLKTLKVTTPTSFAEQDFLNMYFKNIYKPIPVSYNLVLAMLWRHPENVNLEEVKVVHYCAAGSKPWRYTGQEENMQREDIKMLVHKWWDIYNDVSLDYKPLCASETPVDDVDLEPLEPMGHLSKIQGLIVPCF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2227 335 PANTHER GALACTINOL SYNTHASE 1 1 307 - -
Pvu1g2227 335 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 303 IPR029044 -
Pvu1g2227 335 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 300 IPR029044 -
Pvu1g2227 335 CDD GT8_Glycogenin 25 295 - -
Pvu1g2227 335 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 307 - -
Pvu1g2227 335 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2227 Pvu-Chr1 47871225 47873157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2227 1 308 Glycosyltransferase AT1G56600 75.081 3.71e-177 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2227 K18819 - gmx:100809287 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2227 1 47871225 47873157 Pvu1g2227 1 47871225 47873157 ECH
Pvu1g2227 1 47871225 47873157 Pvu7g2093 7 44258087 44259736 ECH