Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2222 ATGGCTATGGCAGCTCCAACTCTAACTCCAATTCGTTCAACAACAACAACCTTGAATCATCAAATCCATGGCCTTCAACTAAAATTCTCAGTTTCCACTTTCAACCCTCCAAACCAAAATAGAAGAAGGAGCGTTCCAATCCGATTAACATCTTCCCCCAATCACAACCAGAATCAGTCCTCTCCCGGATTATACTCCGCAAAGAAATTCGAGCTCACCGTATCCAACGTCGACCTCGTTCTCGAAGATGTTCGCCCTTACCTCATCGCAGACGGTGGAAACGTCGACGTCGTCTCCGTGGAAGACGGCGTCGTATCTCTCCGTCTTCAAGGAGCGTGCGAGAGCTGCCCCAGCTCCACCACAACCATGACGATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGAGATGCCGTTAAGGACATTCGCCAAGTCTACGATCAGCCACCCGAGTATACAACCGTTGAGGCTGTGAATAGTCATCTTGATATATTGAGACCGGCCATAAAGAATTATGGAGGCAGCGTAGAAGTGTTATCCGTTGAAGGTGAGGAGTGCCACGTTAAGTATGTTGGACCTGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTGCCTAG 657 0.4855 MAMAAPTLTPIRSTTTTLNHQIHGLQLKFSVSTFNPPNQNRRRSVPIRLTSSPNHNQNQSSPGLYSAKKFELTVSNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDQPPEYTTVEAVNSHLDILRPAIKNYGGSVEVLSVEGEECHVKYVGPDSIGSGIKAAIKERFPDILNVTFSA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2222 218 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 45 217 - -
Pvu1g2222 218 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 74 145 IPR034904 -
Pvu1g2222 218 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 45 217 - -
Pvu1g2222 218 MobiDBLite consensus disorder prediction 33 63 - -
Pvu1g2222 218 Gene3D - 69 153 IPR034904 -
Pvu1g2222 218 Pfam NifU-like domain 78 137 IPR001075 GO:0005506|GO:0016226|GO:0051536
Pvu1g2222 218 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 152 215 IPR034904 -
Pvu1g2222 218 Gene3D - 154 216 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2222 Pvu-Chr1 47800945 47802823 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2222 K22074 - gmx:100527356 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2222 1 47800945 47802823 Pvu1g2222 1 47800945 47802823 ECH