Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2220 ATGGCAAATAGACCGGATCCAGATATTGATGATGACTTTCGTGAGCTTTATAAGGAGTACACTGGCCCCCCAGGTTCTGGTACTACGAACACGCAAGAGAGGGCAAAACCAAATAAGAGGTCTAATGCAGGGTCTGATGAGGAGGATGAAGCTCGGGACCCTAATGCTGTTCCGACCGATTTCACCAGCCGAGAAGCCAAGGTTTGGGAGGCTAAGTCGAAGGCTACTGAAAGGAATTGGAAGAAAAGGAAAGAGGAGGAAATGATATGCAAGCTTTGTGGAGAATCAGGGCATTTCACTCAGGGCTGCCCGTCTACCCTTGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCCAGAGACAAAAATGTACGGGCACTTTTCACAGAGAAAGTTTTAAGCAAGATTGAAAGGGATATTGGTTGCAAAATTAAGATGGATGAAAAGTTTATTATTGTCAGTGGTAAGGATAGATTAGTTATGGCAAAAGGTGTTGATGCGGTACACAAGATTCGAGAGGAGGGTGATCAAAGGGGATCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTCCAGTTAATGCAAGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCACGAAATACATCTCAGTTTCAACAAAGGTTTGGTAGGCAGGAGAGGGCTGTTGAAGACCGAATCCGGGAGGATGTTCAAAAGTTTGCTAGAGGTTCTCCACAAGCAAGAGCTTATGGAAATAGTGGAGCTAGAGGTCGATCAAGCCAGTCAAGATCTCCAAGACATGCCCCTTTTACAGGAAACTCATATAGTTCTTTTGATGGTCGCAATCAAAACATGGGTGCTTATAGGAATGATGGGTGGGATTCTCATAGAAGAGAATCTGGTATCCAGCCTGGTCATCAGTTTGATTTCAATGCCTCTCCACAGACTTTGGAAGAATTAGAGTTGGAGTATAAGAATGAGGCAGCAGAGCTAATGAAAATTCGAGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAGCAAAGTTGGCTTGGTAAGGGCAACACATGCAAAACAGTGGGAAGATTTTCTTCAGCATGATGCGCAGAGGCGTCAACAACAGGCAGTTCAACAGATGTCATCTGGTTATCGAGGTTTTAAACAGCAGAGCTTTCCTGAATATGATGGGTCCTCTGTCAATCCTCCTCCCTATGCTGGGGCCAATTTACCATTGGATTCAAGGAACAGGTTCTCAGACAATATGGAAACTTATACTACTAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGTGGAGATTTTGGAAAAGCTTACAACAGATATTAA 1392 0.4375 MANRPDPDIDDDFRELYKEYTGPPGSGTTNTQERAKPNKRSNAGSDEEDEARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGDQRGSSSSQMTRSRSPERSPVNARFQRSEPQRSHSGPRNTSQFQQRFGRQERAVEDRIREDVQKFARGSPQARAYGNSGARGRSSQSRSPRHAPFTGNSYSSFDGRNQNMGAYRNDGWDSHRRESGIQPGHQFDFNASPQTLEELELEYKNEAAELMKIRDREEDEENFKHREAIRDLREKYMSKVGLVRATHAKQWEDFLQHDAQRRQQQAVQQMSSGYRGFKQQSFPEYDGSSVNPPPYAGANLPLDSRNRFSDNMETYTTRPHDNFGEFHRRGDFGKAYNRY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2220 463 MobiDBLite consensus disorder prediction 227 244 - -
Pvu1g2220 463 MobiDBLite consensus disorder prediction 256 286 - -
Pvu1g2220 463 MobiDBLite consensus disorder prediction 39 55 - -
Pvu1g2220 463 MobiDBLite consensus disorder prediction 181 226 - -
Pvu1g2220 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Pvu1g2220 463 Coils Coil 320 344 - -
Pvu1g2220 463 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Pvu1g2220 463 MobiDBLite consensus disorder prediction 1 18 - -
Pvu1g2220 463 PANTHER OS01G0252900 PROTEIN 1 463 - -
Pvu1g2220 463 MobiDBLite consensus disorder prediction 174 286 - -
Pvu1g2220 463 MobiDBLite consensus disorder prediction 23 38 - -
Pvu1g2220 463 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Pvu1g2220 463 MobiDBLite consensus disorder prediction 1 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2220 - - gmx:100806099 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2220 1 47787607 47792074 Pvu1g2220 1 47787607 47792074 ECH