Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2217 ATGGCTGCTCCGAACGATCCAGAGAATGCCACGTTACGACCGGAGTCACTGGAAAAGGTTTTCGACTTATCTGACGGGAAATTCGCCGTGAGAGGTGTGCCGTTACTCTCTCACGTACCCGAGAACGTCACTTTCAGCTCCTTCTCCTCAATCTGTGAACCTCGTGACGCCCCACCTTCCATCCTTCAACGTGTCATTGCCGAGTCACGCAAAGGTGGCTTCCTCGGATTCTCCCATGTTTCACCCTCCGACAGATTGATAAACTCCTTGGGAAGTTTCAGTGGCAGAAACTTCGTTAGCATCTTCAGGTTCAAAACATGGTGGTCTACCCAGTGGGTCGGAAATTCCGGTTTAGACATACAAATGGAAACTCAGTGGGTTCTAATGGAAGTCCCCGAAACAGAATCCTATGTCGTGATCATTCCCATTATAGAAAAAAGTTTCAGGTCTGCTCTTCACCCTGGCTCTGATGACCATGTCATGATTTGCGCGGAGAGTGGTTCTACTCAGGTGAGAGCATCGAGTTTCGGTGCAATTGCATATGTCCACGTGGCTGAAAACCCTTACAACTTGATGAGAGAGGCCTATAGTGCTCTCAGGGTTCACCTTAACTCGTTTAGGTTGTTGGAGGAGAAAACGGTGCCAAGAATTGTTGATAAATTCGGGTGGTGCACTTGGGATGCCTTTTACTTAACCGTGAACCCTGTTGGGGTTTGGCATGGACTAAAGGATTTTAGTGAGGGTGGCGTGGCTCCGAGGTTTGTTGTCATCGATGATGGTTGGCAAAGTGTGAATTTTGATGATGGTGACCCCAACGAGGATGCTAAGAATCTTGTTCTTGGTGGGGAACAGATGACTACCAGGCTTCATAGGTTTGAAGAAGGCGACAAGTTTAGAAAATACCAAAAGGGACTTCTCTTGGGTCCTGATGCTCCTTCTTTCAACCCGGAGACGATTAAGGAGTTGATTTCGAAGGGGATTGAAGCTGAGCATTTGGGGAAGCAACGTGATGCGGCTGTTTCAGCTGGGGGTTCGGATTTGGCCGAGATAGAGTTGATGATTGTGAAGGTGAGAAAGGAAATTGATGATCTTTTTGGGGGGAAGGGAAAGCAGAGCAACGAAAGTGGAGGGTGTTGTTGCAAAGCACCGGAGTGTGGTGGGATGAAGGATTTCACAAGGGACTTGAGGACTGAATTCAAAGGTTTGGATGATGTTTATGTGTGGCATGCGCTCTGTGGCGGATGGGGTGGTGTGAGGCCAGGAGCTACACATCTGGATTCGAAAATAACACCATGCAAACTCTCTCCTTCCCTTGATGGAACCATGCAAGATCTAGCAGTACTTAAAATAGTGGAAGGTTCCATAGGGCTTGTTCATCCTCACCAAGCTAATGACCTCTACGATTCCATGCACTCTTATCTTGCCCAAGCCGGTGTTACTGGAGTCAAAATTGACGTCATTCATAGTCTTGAATACGTATGCGAGGAATATGGGGGCAGAGTGGAGATTGCCAAGGCTTATTACGATGGGTTGTCAAACTCCATTTACAAGAATTTCAATGGAAGTGGAATCATCGCTAGCATGCAGCAGTGCAACGATTTCTTCTTCCTTGGAACCAAGCAAATTGCCTTGGGAAGAGTTGGGGATGATTTTTGGTTCCAAGATCCCAATGGGGACCCAATGGGAGTGTTCTGGCTACAGGGGGTGCACATGATTCACTGTTCCTACAACAGCTTGTGGATGGGACAGATAATTCAACCCGATTGGGACATGTTTCAATCGGATCATGAGTGTGCCAAATTTCATGCTGGTTCAAGGGCTATTTGTGGTGGTCCTGTCTATGTGAGTGATAGTGTTGGCTCTCATGATTTTGATCTCATTAAGAAGCTTGTCTTCCCTGATGGTACCGTGCCCAAATGTATATATTTTCCCCTTCCAACAAGAGACTGCCTTTTTAGGAACCCTCTCTTTGACCAAAAAACCGTTCTCAAAATTTGGAACTTCAATAAGTATGGAGGAGTAATTGGTGCTTTCAACTGTCAAGGGGCTGGTTGGGACCCAAAGGAGAAGAAATTCAGGGGCTTCCCAGAGTGCTACAAACCAATATCATGCACTGTTCATGTAACTGAGGTTGAATGGGACCAAAAGAAAGAAGCAGCCCATATGGGTAAGGCAGAGGAGTATGTTGTGTACCTCAATCAGGCGGAGGTACTGCATTTCATGACCCCCAACTCTGAACCACTGCAATTAACTATTCAACCTTCCACTTTTGAAATCTGCAACTTTGCCCCAGTCCAAAAGCTAGATGGCAACATAAAATTTGTACCCATTGGGCTCACAAACATGTTCAACAGTGGAGGGACAATTCAAGAATTGAAGTATTTTGAGAAGGGTGTTAAGATTAAGGTTAAGGGTGGTGGGAGACTCCTTGCTTACTCAACTCAATCTCCAAAGAAGTTCCAACTCAATGGTTCTGATGCTGCTTTTGAGTGGCTGCCTGATGGCAAACTCACTCTCAACCTTCCTTGGATTGAAGAGAATGGCGGGGTTTCTGATCTGGCAATTTTCTTCTAG 2574 0.4635 MAAPNDPENATLRPESLEKVFDLSDGKFAVRGVPLLSHVPENVTFSSFSSICEPRDAPPSILQRVIAESRKGGFLGFSHVSPSDRLINSLGSFSGRNFVSIFRFKTWWSTQWVGNSGLDIQMETQWVLMEVPETESYVVIIPIIEKSFRSALHPGSDDHVMICAESGSTQVRASSFGAIAYVHVAENPYNLMREAYSALRVHLNSFRLLEEKTVPRIVDKFGWCTWDAFYLTVNPVGVWHGLKDFSEGGVAPRFVVIDDGWQSVNFDDGDPNEDAKNLVLGGEQMTTRLHRFEEGDKFRKYQKGLLLGPDAPSFNPETIKELISKGIEAEHLGKQRDAAVSAGGSDLAEIELMIVKVRKEIDDLFGGKGKQSNESGGCCCKAPECGGMKDFTRDLRTEFKGLDDVYVWHALCGGWGGVRPGATHLDSKITPCKLSPSLDGTMQDLAVLKIVEGSIGLVHPHQANDLYDSMHSYLAQAGVTGVKIDVIHSLEYVCEEYGGRVEIAKAYYDGLSNSIYKNFNGSGIIASMQQCNDFFFLGTKQIALGRVGDDFWFQDPNGDPMGVFWLQGVHMIHCSYNSLWMGQIIQPDWDMFQSDHECAKFHAGSRAICGGPVYVSDSVGSHDFDLIKKLVFPDGTVPKCIYFPLPTRDCLFRNPLFDQKTVLKIWNFNKYGGVIGAFNCQGAGWDPKEKKFRGFPECYKPISCTVHVTEVEWDQKKEAAHMGKAEEYVVYLNQAEVLHFMTPNSEPLQLTIQPSTFEICNFAPVQKLDGNIKFVPIGLTNMFNSGGTIQELKYFEKGVKIKVKGGGRLLAYSTQSPKKFQLNGSDAAFEWLPDGKLTLNLPWIEENGGVSDLAIFF* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2217 857 PANTHER - 1 857 IPR008811 -
Pvu1g2217 857 SUPERFAMILY (Trans)glycosidases 217 630 IPR017853 -
Pvu1g2217 857 Pfam Raffinose synthase or seed imbibition protein Sip1 21 840 IPR008811 -
Pvu1g2217 857 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2217 Pvu-Chr1 47752802 47756576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2217 12 857 Glycoside Hydrolase AT4G01970 57.243 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2217 K06611 - gmx:100815922 1556.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2217 1 47752802 47756576 Pvu1g2217 1 47752802 47756576 ECH