Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2216 ATGACGATCGGAGATGCTTTTCTATGCTTACTATTAATTGCAACTTGTTGGATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGAGGTTTTGTTGAGGCAAGCTCATCGTTGGTAAAATCGAGAAAACAAACTGATACCAAGTTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGACAGAACACAATGCGCTCCAAATGGATACTACTTTATTCCAGTATATGACAAGGGCTCCTTTGTAATTAAAATTAATGGACCTCCCGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTGGTTGACAATAATGGTTGCAATGGCAATGAAGATATAAACTTTCGTTTCACAGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTAGGGGGAGAAAGCTGCTCAATTAAAAATGGAGGCCCATCAAATGTAAAAGTTGAATTATTATCCCTTTCAGGCGATCTTGTCTCTTCCGTCTCAACTTCATCATCAGGGAGTTACTTGTTTACAAATGTCATTCCAGGAAAATATGAACTACGTGCTTCAAATCCTGGTATGGAAGTTGAAGTTAAAGGTTCAACACAGATTGAATTGGGCTTTGGAAACGGGGTAGTTGATGATGTTTTCTTTGTCCCTGGATATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCTATTGTAGGAGTTCATATTTTCTTATATTCAGATGATGTTTCTAACGTAGAATGTTTGCAAGGCTCTGCTACTGGCCCACGACAAGAAAAAGCTCTTTGTCATGCTGCATCAGATGCCGATGGAATGTTCACATTCAATTCAATACCTTGTGGGAGTTATGAACTTGTTCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCACCCAGCGTTTCAGTTAATGTCAAGCATCAGCATGTAACGGTGCCTCCAAAATTTCAGGTAACTGGATTTTCTATTGGAGGCCGTGTAGTTGATGGAAATGGCTTGGGAGTGGAGGGTGTCAAAATCATAGTTGATGGTCATAAAAGGTCAATTACTGATAATCAAGGATATTACAAACTTGATCAGGTTACATCCAAGCACTATACCATAGAGGCCCAAAAGGAGCATTACAAATTCAAGAATTTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATCAATGCCATTTCATACAATCTTTGTGGTTTGGTTAGGATGGCTAATGGTGGTTTGAAAGCAAAGGTAGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTTCTTCCTGGTGAATATCGGTTGTCAGCCATTGCTGCAACTCCTGAGAATGCTGCTGGACTCATGTTTGCTCCATCTTATATCGATGTTGTGGTCAAAAGTCCCCTGTTGAATATTGAATTTTCACAAGCTCTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATTTGTTACTGTTACTCTGGTGAGACAGGTTGAGAAACATAATGGAGAGAGAAAAACAATTAGGTTGACCGCTGAGAGTAGTGAATTTCAGTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTCAAACACAGTTCCCCTGAATCAGTCACCTTGGAAGATAATTGGTGCTGGGAACAGAGCTTCATAGATGTAAATGTTGGTGCTGAGGACGTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATGTTATCTCCACTCACAATGTTGATGGTTACCTGACTCAACCAGATGGGTCAATTGTGAATTTGAAAATTCAGAAAGGTTCCCAGCGTATATGTGTAGAACATCCTGGTGTACATGAATTTAGCTTTGTTGACTCGTGTATCTTCTTTGGGAGTTCATCCGTGAAAATTAACACATCTAATCAATCGCCCATCCACCTTACTGGAGAAAAGTATCTTCTTAAAGGACAAATAAGTGTGCAGTCAGGCTTACTTGATGCATTACCTGAGAAAATAGTTGTTGATATCAAACATGACGAAGCTGGTGTTATTGATTATGCTACAGCCACACTGAAGTCCCATGCGAAAGATCAAACAGATACTGCTATATTTGAGTATTCTGTTTGGGGCAATCTAGGAGAAAAACTTACCTTTGTTCCTTGGGACTCGAGGAATGATGGGGAGAAGAAACTTTTATTTTATCCTAGAGAACATCAAGTAACAGTGGCAGATGATAATTGTCAAGCTTATATTCCTGCATTTTCTTGTCAAGTGGGTGCTTACATTGAAGGATCAGTTTCACCTCCTCTTTCTGGTGTCCATATCAGAGTTTTTGCTGCTGGAGCCAGCAGCATTACTGCATTTAAAAGTGGTGAACTAGTTCTTGAAACAACCACTGATGCTGATGGTTCCTATGTGGCAGGACCTCTGCACAATGACATCGGTTACAATGTTGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCACCTCATTCTTTTACTTGTCAAAAGCTTAGTCAAATTTTTGTACACATACATCACAAAGATGATGCTAAAGAGCCCATTCCTTCTGTTCTGTTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCAGTATCAGGAACTGGAGGGACATTCCAGTTTGATAATTTGTTTCCTGGAACGTTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCGATAGAACTTGGAGCAGGGGAGTTCAGAGAAGTTATTTTCCAGGCCACGCGCGTAGCCTACAGTGCTACTGGTGTTGTCACTCTGTTGTCTGGACAACCCAAAGGAGAGGTTTCAGTTGAAGCCCGGTCAGAGTCAAAAGGCTATTTTGAGGAAACAGTGACAGATTCCCATGGAAATTATCGTCTGAGAGGACTACAGCCTGACACTGTCTATGTTGTCAAAGTGGCTAGAAGGGATGCTCTAGGCAGTTCTAATATAGAACGTGCATCTCCAGATTCAATTGCTGTGAAGGTTGGAACTGAAGATATCAAGGGTTTGGATTTTATAGTTTTTGAGCAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAATGGTACAGATGAACTACGTAAACATCTGATGGTAGAAATTAGGTCCGCCACTGACCTTAACAAGATAGAGTCAGTCTTCCCCCTGCCAATTTCTAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGAAGACACCTTCTACAGCTTCAATCTGGTCTCCCACAAAGCTCGCTTAAGTTTGAATCTGATATCATTGAGGTTGACTTGGAAAAAAATGTTCAAATCCATGTGGGCCCGCTGATATACAGGATTGAAGATCAACTGAAGCAGGAGTTGACTCCTGCACCAGTATTCCCTCTTATAGTTGGATTCCTAGTAGTTTCATTGTTTATTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACAGTAGACATACCTACACCGGGACTCAATGCGGCTTTAAGAAAAGACGTGAAGAAGCCAATGTTGCGAAAGAAGACCTATTAA 3591 0.4094 MTIGDAFLCLLLIATCWISAASADSIYGCGGFVEASSSLVKSRKQTDTKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSIKNGGPSNVKVELLSLSGDLVSSVSTSSSGSYLFTNVIPGKYELRASNPGMEVEVKGSTQIELGFGNGVVDDVFFVPGYSISGFVVAQGNPIVGVHIFLYSDDVSNVECLQGSATGPRQEKALCHAASDADGMFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNVKHQHVTVPPKFQVTGFSIGGRVVDGNGLGVEGVKIIVDGHKRSITDNQGYYKLDQVTSKHYTIEAQKEHYKFKNLENYMVLPNMASIEDINAISYNLCGLVRMANGGLKAKVALTHGPDNVKPQKKQTDENGNFCFEVLPGEYRLSAIAATPENAAGLMFAPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVTVTLVRQVEKHNGERKTIRLTAESSEFQFSDVIPGKYRLEVKHSSPESVTLEDNWCWEQSFIDVNVGAEDVEGILFVQKGYWVNVISTHNVDGYLTQPDGSIVNLKIQKGSQRICVEHPGVHEFSFVDSCIFFGSSSVKINTSNQSPIHLTGEKYLLKGQISVQSGLLDALPEKIVVDIKHDEAGVIDYATATLKSHAKDQTDTAIFEYSVWGNLGEKLTFVPWDSRNDGEKKLLFYPREHQVTVADDNCQAYIPAFSCQVGAYIEGSVSPPLSGVHIRVFAAGASSITAFKSGELVLETTTDADGSYVAGPLHNDIGYNVEASKPGYHLKQVAPHSFTCQKLSQIFVHIHHKDDAKEPIPSVLLSLSGDNGYRNNSVSGTGGTFQFDNLFPGTFYLRPVLKEYAFSPPAQAIELGAGEFREVIFQATRVAYSATGVVTLLSGQPKGEVSVEARSESKGYFEETVTDSHGNYRLRGLQPDTVYVVKVARRDALGSSNIERASPDSIAVKVGTEDIKGLDFIVFEQPEMTIISCHVEGNGTDELRKHLMVEIRSATDLNKIESVFPLPISNFFQVKGLSKGRHLLQLQSGLPQSSLKFESDIIEVDLEKNVQIHVGPLIYRIEDQLKQELTPAPVFPLIVGFLVVSLFISMPRLKDLYQATVDIPTPGLNAALRKDVKKPMLRKKTY* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2216 1196 Gene3D - 328 402 - -
Pvu1g2216 1196 SUPERFAMILY Cna protein B-type domain 864 921 - -
Pvu1g2216 1196 Gene3D Immunoglobulins 143 215 IPR013783 -
Pvu1g2216 1196 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 7 1175 - -
Pvu1g2216 1196 SUPERFAMILY Cna protein B-type domain 146 197 - -
Pvu1g2216 1196 SUPERFAMILY Starch-binding domain-like 218 297 IPR013784 GO:0030246
Pvu1g2216 1196 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Pvu1g2216 1196 PANTHER NODAL MODULATOR 1-RELATED 7 1175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2216 - - ccaj:109814730 2167.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2216 1 47721519 47738278 Pvu1g2216 1 47721519 47738278 ECH