Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2212 ATGGAAGATTTGGGAGGTACCCGGTTTGATGGCCTCAGTAATGCTGTGAGGAGGAAGAGGAGTCAGACTTCACGCAGGCCGCGACCTGATTCCCAGCCTGTTTCTGATGGTCAAGAACTGTCTCCCTTGTCCTCAACGCCGTCAGAGGATGCTGGCAAGATCTCTAGTGATGAGAATGTTGGCTACGATGCAAATTCCAAGAGAAAGGAGTTCAATCTCAATCATTGTGTCTCTCAAACTTCATCGGCTACAGGAGCTGAAGACGACAAATCCCATAAAAAGAGTAAAAAGGACGGTGGGTTCCAAGCATTTTATAATAATGAACCTGGACGAAGTGGTTTGCATAATAAACGCTGTAGTGAAGGTGTTCTTGCTCCGGCAAATTGGAGAGGTTCCAGCAAAGCTAAGGATAGCTTGGATTTAGAGTCCAGAAATGCAGATTTGTATGGTGGAAGGAATCCTGAGAGTGTGAATTTGGCACAGTTTGGTGGCCCTCAAGATGGATTGGGAAATGAGAACCGGGTTAAAAAGGTTAAACTCAAGGTTGGCGGGGTGACACATACTATTCAAGCTAATTCAGCAGCCAATAGTGCTTCAGGAAGTGGATCAACAATGAAGAGCTCTCGCTCATCGGATGCATCCAGACCACGCCAAAAACAACAGAGTAATTCAGATGATAATAATTCTCCTTCTGACAAGAGGAGTGGTCTACAAGGTGTTCCTTGGAAGGATTTCTCAAGAGGTGGTTTTGGTCTTGGGAAAGAGGAATCATTGATGGGGAAGATTTCTGGAAAGAACTCATCTAGTAAGCTGGGAGACAAGTCTGAACCAGTTCGGAAGAGTAAGCGAGTACCAAAGAGACGAGTACTTGATGGGGAATTTGGTGACGATGATGAGGATGATGAGATTCGGTACTTGGAAAAACTGAAAACATCAAAAGTTTCGGCAGTCTATAGAGATGAAGAAGAATTAAGCAAAAAACATCGAAAGCTCTCTAATATGGAAAATGCTGCCTCAACAAGGTCAGGTAAAGACAGTAAGAAAAAGTCTAGATCTGATAGAGTGTATGAGGACACCGATTATGAAGATGAAGAGGAGTCAGGGTCTGAAGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAGTCTGTTGATGTATTGATGGACGGTAACAAGAGGGAAATTACTCTTACAACTCGTCAACGGGCCCTTCAATCAAGCAAAGACGCCTCTGCATCGAGTGCTAGTTTAATTGAGTTTCCCAATGGATTACCACCTGCCCCTCCTAGAAAGCAAAAGGAGAAGCTTTCAGAGGTAGACCAGCAAGTGAAGAAAGCTGAGGCTGCACAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAGGCTATCAGAAAAATACTTGGTCAAGATTCTAGTAGAAAAAAACGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAAATGGCACAGGAAAAAGCAGCAAATGCAAGAATGCATGCGTCAAATACCATCAAATACACAATGGGCCCAACTGGAACAATAGTGACTTTTCCTGAGGAAATGGGGTTCCCTAGCTTATTTAACTCTAAACCTGTCAGTTATCCTCCACCTCGCGAGAAGTGTGCTGGACCATCTTGTTCCAATCCTTACAAGTATCGGGATTCAAAATCAAAACTTCCTCTTTGCAGTCTCCAATGCTACAAGTCTGTCCAGGAGAAGGTGGTGGCTGAAACTACCTGTTGA 1761 0.4418 MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQPVSDGQELSPLSSTPSEDAGKISSDENVGYDANSKRKEFNLNHCVSQTSSATGAEDDKSHKKSKKDGGFQAFYNNEPGRSGLHNKRCSEGVLAPANWRGSSKAKDSLDLESRNADLYGGRNPESVNLAQFGGPQDGLGNENRVKKVKLKVGGVTHTIQANSAANSASGSGSTMKSSRSSDASRPRQKQQSNSDDNNSPSDKRSGLQGVPWKDFSRGGFGLGKEESLMGKISGKNSSSKLGDKSEPVRKSKRVPKRRVLDGEFGDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSNMENAASTRSGKDSKKKSRSDRVYEDTDYEDEEESGSEGELEDKKKKKQRKESVDVLMDGNKREITLTTRQRALQSSKDASASSASLIEFPNGLPPAPPRKQKEKLSEVDQQVKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEEMAQEKAANARMHASNTIKYTMGPTGTIVTFPEEMGFPSLFNSKPVSYPPPREKCAGPSCSNPYKYRDSKSKLPLCSLQCYKSVQEKVVAETTC* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2212 586 MobiDBLite consensus disorder prediction 317 510 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 341 357 - -
Pvu1g2212 586 Coils Coil 480 500 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 27 53 - -
Pvu1g2212 586 Pfam PAPA-1-like conserved region 443 527 IPR006880 GO:0031011
Pvu1g2212 586 MobiDBLite consensus disorder prediction 187 302 - -
Pvu1g2212 586 Coils Coil 441 468 - -
Pvu1g2212 586 Pfam HIT zinc finger 543 574 IPR007529 -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 433 499 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 145 175 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 317 334 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 187 235 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 71 85 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 371 391 - -
Pvu1g2212 586 PANTHER INO80 COMPLEX SUBUNIT B 1 586 IPR029523 GO:0006338|GO:0031011
Pvu1g2212 586 SMART PAPA_1_2 442 527 IPR006880 GO:0031011
Pvu1g2212 586 MobiDBLite consensus disorder prediction 272 293 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 1 118 - -
Pvu1g2212 586 MobiDBLite consensus disorder prediction 399 420 - -
Pvu1g2212 586 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 586 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2212 - - gmx:100814323 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2212 1 47694704 47698872 Pvu1g2212 1 47694704 47698872 ECH