Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2206 ATGGAGAGACAGAGAAGTTTCTCCTTCAAACCCTCTAGGCTTTTGGTTTTCTCATTCACTATCTTTTCATCGATTTTCTTCCTTTCCACCTTCACCACCTGGCTCACCAATTACGCACCTTCAATTCACCAACAGATTCATCTTCACTTCAACACTTCTTTTTCTTTTTCTTCTTCTTCTTCTTCAACTTTTACTACTAATACTTCATCATCATCTTCTTCAACTTTTACTACTAATACTTCATCATCATCTTCTTCAACTTTCACTACTAATATTTCATCATCATCTTCTTCTTCTTCTTCTGTTGGTGACGGTGACAGTGTGGCTCTTCCACCTTTATCTGTTCAGTCCCTGACCAAAAACTTCACAGTGGGTGGTGCGAAAATTTCAGCTTTGATCGATAACCGTCTTGCCAGGACCCAGAAAAGCTACTCCAGATCCAAATCTGAACCGGTACGACACCATGTTGGTGCTTCGAATGTCAATTTCACGGCACTGCGAGAGTATGGAACTTCGCCTGAGAGGGTACCCAGCAACGAGCGGGAGAAGATAGTAGCTTTAGATGGGAATACTCAAGTTCCTTTTCTGAAGAAGATTGAGCAGAAGGGAGTTGAAGGGTGTGATTTAACAAAAGGGTATTGGGTTTTTGATGAAAGCTATGCCCTTTATTCCAAAGATTCGTGTCCTTTCATAGATGAAGGTTTTGATTGTGTGGGGAATGGAAGATTGGATAGAGACTACTCTAAGTGGAGATGGCAGCCCAAAGACTGTGACATTCCGAGGTTCAATGCAACTAAAATGCTGGAGTTGATAAGAGGGAAACGGCTTGTTTTTGTGGGTGATTCGATTAATAGGAACCAATGGGAATCGATGTTGTGCATGTTATTGGGTGGTATTAAAGATCCATCGAGAGTGTATGAGACCCGTGGAAGGAAAATTACCAAAGAGAAGGGAAATTATAGTTTCAGGTTTCTGGATTATCAATGTACGGTTGAATACTATGTCAGTCATTTCTTAGTTCATGAAAGCAAGGCAAGAATTGGGCAGAAACGAAGACCAACCTTGCGAATTGATGCCATTGATCACGGTTCATCAAGATGGAGGGGAGCTGATGTTTTGGTTTTCAACACTGCACATTGGTGGTCACATCACAAAACAAAAGCTGGGATTTATTACTACCAAGAAGGAAGTCTAGTTCATCCCCAGCTAAATGTTTCCACAGCTTTCAGGAAAGCTTTAAGGACTTGGACTTCATGGGTGGACAGACACATCAATCACAGAAAAACCCGAGTTTTCTTTCGAAGTTCAGCACCATCACATTTCAGTGGTGGTGATTGGAATTCTGGAGGGCATTGTACAGAAGCCACTCTTCCTCTGAATGAAACCTTATTAAGCACTAGTTATCCTGAGAAGAACATAATGGTAGAGCAGATAATAAAGCAAATGAAAACTCCTGTGACATTGTTGAATATAACTAGTTTGTCAGCATATAGGATCGATGGTCACCCATCAATTTATGGGAGAAAAACACGGTCCTCTAGGATTCAAGATTGTAGCCATTGGTGTCTTCCAGGGGTTCCAGATACATGGAACGAATTGTTATATTTTCATTTACAGAGTAGATGA 1626 0.4096 MERQRSFSFKPSRLLVFSFTIFSSIFFLSTFTTWLTNYAPSIHQQIHLHFNTSFSFSSSSSSTFTTNTSSSSSSTFTTNTSSSSSSTFTTNISSSSSSSSSVGDGDSVALPPLSVQSLTKNFTVGGAKISALIDNRLARTQKSYSRSKSEPVRHHVGASNVNFTALREYGTSPERVPSNEREKIVALDGNTQVPFLKKIEQKGVEGCDLTKGYWVFDESYALYSKDSCPFIDEGFDCVGNGRLDRDYSKWRWQPKDCDIPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLLGGIKDPSRVYETRGRKITKEKGNYSFRFLDYQCTVEYYVSHFLVHESKARIGQKRRPTLRIDAIDHGSSRWRGADVLVFNTAHWWSHHKTKAGIYYYQEGSLVHPQLNVSTAFRKALRTWTSWVDRHINHRKTRVFFRSSAPSHFSGGDWNSGGHCTEATLPLNETLLSTSYPEKNIMVEQIIKQMKTPVTLLNITSLSAYRIDGHPSIYGRKTRSSRIQDCSHWCLPGVPDTWNELLYFHLQSR* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2206 541 Pfam PMR5 N terminal Domain 206 258 IPR025846 -
Pvu1g2206 541 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 125 540 IPR029962 GO:0016413
Pvu1g2206 541 MobiDBLite consensus disorder prediction 65 88 - -
Pvu1g2206 541 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 259 535 IPR026057 GO:0016740
Pvu1g2206 541 PANTHER - 125 540 IPR029965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2206 Pvu-Chr1 47656035 47658639 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2206 - - pvu:PHAVU_001G213200g 996.112