Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2203 ATGGCAACCATGACTGGAGTGAGCCTTTCAAGCCCCAGGGTTTGGTTCAACGCATCGGGCTCACCGCAAAATGCGCACGCTATAAATTTTGCACTTCCACTGCGCCAAGCGATGCGACCGGGTGGCATCCAGATGGGTCGGGTGACGAGGATCCGACCCGTTCGCGCCGCGCCGGATAAGATATCGGAGAAGGTGGAGGAGAGCATAAAGCAAGCGCAGGAAGCGTGCGCCGGCGATCCCACGAGCGGCGAGTGCGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCGAGGGACAAGCAAAAGGAAAAGGATTCGGACCCTCTGGAGAACTACTGCAAGGACAACCCGGAGACCATAGAGTGCAAAACTTTCGATGACTGA 399 0.599 MATMTGVSLSSPRVWFNASGSPQNAHAINFALPLRQAMRPGGIQMGRVTRIRPVRAAPDKISEKVEESIKQAQEACAGDPTSGECVAAWDEVEELSAAASHARDKQKEKDSDPLENYCKDNPETIECKTFDD* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2203 132 SMART CP12_2 61 132 IPR003823 -
Pvu1g2203 132 Pfam CP12 domain 61 131 - -
Pvu1g2203 132 MobiDBLite consensus disorder prediction 97 120 - -
Pvu1g2203 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 132 IPR039314 -
Pvu1g2203 132 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2203 Pvu-Chr1 47640156 47641149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2203 - - gmx:100812168 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2203 1 47640156 47641149 Pvu7g2203 7 45319074 45319780 PCT